| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1622 |
|---|
| Symbol | |
|---|
| ID | 4205280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1813781 |
|---|
| End bp | 1814284 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642566173 |
|---|
| Product | ferripyochelin binding protein |
|---|
| Protein accession | YP_698938 |
|---|
| Protein GI | 110802093 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000492674 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATTG AAATTAGAGG AAAGAAGCCT GAAATAGGGG AAAAAACATT TATAGCTCAC
AGTAGTGATA TCATTGGTGA TGTTACTATA GGAAGAGATT GTGGAGTTTG GTTTGGATCT
GTAATAAGAG GAGACTATAA CTTAATTAAA ATAGGAAATG AAACCAATGT ACAAGATAAC
GCAGTATTGC ATGGTGATAA AGAATATAAA GTTGAAATTG GTCATGGTGT TACTATAGGA
CATGGTGCTA TAATACATGG GTGTAAGATA GAGGATGAAT GCTTAATTGG TATGGGAGCA
ATAATATTAA ATGGAGCAAA AATAGGAAAA AACACTATGA TTGCTGCAGG AACTTTAGTA
AGTCAAAACA AGGAAATACC AGAGGGCGTA TTAGTCATGG GAGTTCCAGG AAAGGTTGTT
AGAAAACTTA CTGAGGATGA AATTGAAAGT ATAAAAAATT CAAGAAGAGA ATATGTAAAG
ATGAAAAATC TTTATATTAA ATAA
|
|---|
| Protein sequence | MLIEIRGKKP EIGEKTFIAH SSDIIGDVTI GRDCGVWFGS VIRGDYNLIK IGNETNVQDN
AVLHGDKEYK VEIGHGVTIG HGAIIHGCKI EDECLIGMGA IILNGAKIGK NTMIAAGTLV
SQNKEIPEGV LVMGVPGKVV RKLTEDEIES IKNSRREYVK MKNLYIK
|
|---|
| |