Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1605 |
Symbol | |
ID | 4205953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1795914 |
End bp | 1796873 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566156 |
Product | putative teichoic acid linkage unit synthesis protein |
Protein accession | YP_698921 |
Protein GI | 110803974 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000246024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT ATTTAATTGT AATGCTTATT CCTTTTGTCA TAGTATATCT ATTAATGCCA AAGTTTATTG AATTTGCAAC TAAAAAGGGT TTTGTTGATA AGCCTACAGG AAGAAAAAAA CATGATAAAT TAACACCTTT AATAGGTGGG GTTGTTATGT ATATAGGATT TTTTGCAACA TACCTTTTTG GAATAGATTC TACAAGGCAA TTATCACAAA CTTTTATTAT ATTTATAGCA TCTACTTTGG TAATAATAAT AGGAGTGATT GATGACTATT ATAAGGGAAA GGGCAAAGAG TTTCCAATTT ATCCAAGGGT TATAATTCAA ATTTTAGCTG CAACTATGGT TTTTAAAGCT GGGATTGTTT TTAGAGGTAT AACTAATCCA TTTACTGGAG AGTTTACTCA ATTTTCAGGA TGGATTCAAT ATATACTTAC AATAACATGG ATTTTTGGGG TTACTACAGT AATAAACTGG TCTGATGGAA TGGATGGATT AGCAGGAAGC ATTTCCATAA TATCTGCTAT GACTATGTTT GTTGTTGCTC TTGCAAAAGG ACAATTTAAC TCTGCATATA TGTCAATAAC TCTAGTAGGG TCAATATTAG CCTTTTTAAG ATATAATAGA CATCCAGCGA GGGTATTTAT GGGTGATTCA GGTGCTAACT TTTTAGGGTT TATTTTAGCT ATTATAGCCT TAGAAGGTGC TTTTAAGCAA GCAACAGCAT TATCTATATT AGTGCCAGTA TTAGCCTTAG GAGTTCCTAT TTTTGATAAT ATCTTTGTAA TTTTTAGAAG ATTTCAATCT GGAAAGCCTG TCTATGAAGC TGATAGAAGC CAAATACATT ATAGGCTACA AGAAAGAGGA ATGTCTGTAA AGCAAATTGT GTCATATATA TGCATACTAA GTGGATGTTT AAGTTTAGTA TCATTATTAA TAATTATGAT AATATTATAA
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Protein sequence | MIKYLIVMLI PFVIVYLLMP KFIEFATKKG FVDKPTGRKK HDKLTPLIGG VVMYIGFFAT YLFGIDSTRQ LSQTFIIFIA STLVIIIGVI DDYYKGKGKE FPIYPRVIIQ ILAATMVFKA GIVFRGITNP FTGEFTQFSG WIQYILTITW IFGVTTVINW SDGMDGLAGS ISIISAMTMF VVALAKGQFN SAYMSITLVG SILAFLRYNR HPARVFMGDS GANFLGFILA IIALEGAFKQ ATALSILVPV LALGVPIFDN IFVIFRRFQS GKPVYEADRS QIHYRLQERG MSVKQIVSYI CILSGCLSLV SLLIIMIIL
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