| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1603 |
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| Symbol | rbsK |
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| ID | 4205411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1794221 |
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| End bp | 1795153 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566154 |
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| Product | ribokinase |
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| Protein accession | YP_698919 |
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| Protein GI | 110802146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000677641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA TATGTGTACT TGGAAGTATG AATATGGATT TAGTTTTAAA GGTTAAAGAT
ATGCCTAAAG TAGGAGAAAC TATACTTTCT AAGTCATTTC AAAAAATAGC TGGTGGAAAA
GGAGCTAATC AAGCAGTAGC AGCTAAAAGA AGTGGTGCAG AAGTTTTCAT GATTTCTAAA
ATAGGAAAAG ATGAAAATGG AAGAGAGTTA AGAGATAAAT TGGTAGAAGA TAATATAGAT
GTTAAGTATG TTTTTGAAGA TAGAATAGAG CCAACTGGAA TGGCTTTAAT AATGGTAAAT
GATAATGGAA ATAATTCAAT AATTGTTAAT GCTGGTTCAA ATATGACATT AACAAAAGAT
GAAATACATA GTGCTGAAAA TTTAATAAAA GAATCAGATA TTATAATTTC ACAATTTGAA
ACACCAGAGG ATATTACAAT AGAAGCATTT AAAATAGCTA AGGAAAATGG AAAAGTTACA
ATATTAAATC CAGCTCCAGC TAAAAAAATA AAAGATCAAT TATTAAAATA TACAGATATA
ATAGTTCCAA ATGAAACAGA AGCAGAGCTT TTAACTGGAA TTGAAATAAA AGATATAGAA
GATGCTAAAA AGGCTGGGGA TATATTTTTA GATAAAGGAG TTAAGTTTAT AATTATTACT
CTTGGTGAAA AGGGAGCAGC TTTAATAGGA AAAGATTTTT GTGAAATAGT TCTAGCGTAT
AGAGTTAATG CAATAGATAC TACAGCTGCT GGAGATAGCT TCATTGGAGG CTTAAGTTCA
AAGTTAGATA CTAAAAATTT AGGAAGAGAG ACTTTAAGTA GCTCCATAAG ATTTGGAAAT
AAGGTATCAT CAATAGCAGT ACAAAGAAAA GGAGCTCAAC CATCAATACC ATATTTACAT
GAAGTTTTAG AAGTTTATAA GGGAGAAGAG TAA
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| Protein sequence | MNKICVLGSM NMDLVLKVKD MPKVGETILS KSFQKIAGGK GANQAVAAKR SGAEVFMISK
IGKDENGREL RDKLVEDNID VKYVFEDRIE PTGMALIMVN DNGNNSIIVN AGSNMTLTKD
EIHSAENLIK ESDIIISQFE TPEDITIEAF KIAKENGKVT ILNPAPAKKI KDQLLKYTDI
IVPNETEAEL LTGIEIKDIE DAKKAGDIFL DKGVKFIIIT LGEKGAALIG KDFCEIVLAY
RVNAIDTTAA GDSFIGGLSS KLDTKNLGRE TLSSSIRFGN KVSSIAVQRK GAQPSIPYLH
EVLEVYKGEE
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