| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1599 |
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| Symbol | rbsB |
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| ID | 4205043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1790355 |
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| End bp | 1791260 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566150 |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_698915 |
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| Protein GI | 110803234 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.078071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAA ATAAAAAGAT ATTTTCAGTT GGATTAATGC TCATGATGCT TATGACTTCA
TTTATAGGGT GTGGAAGAGA TAATAAGCCT AAAATAGGAA TGGTATTATC AACTCTTAAT
AACCCATTCT TTGTAAATAT GAAAGATGGA GCAGAAAAAG AGGCTGAAAA ATTAGGATAT
GATTTAGTAG TATTAGATTC TCAAAATGAT CCAGCTAAGG AAAGAGCAAA TGTAGAGGAT
TTAATACAAT TAGGAGTTAT TGCCTTACTT ATAAATCCAA CAGATAGTGA TGCCGTAGTT
AAGACTGTTG AGGTAGCTAA TAAGAGTAAT ATTCCAGTAA TAACATTAGA TAGACAAGCT
AATGGTGGAA AAATAACAAG TCATATAGCT TCAGATAATA TAAAAGGTGG AGAAATGGCT
GCTGAGTATG TATTAGATAA ATTCAAAGAT GAAAAAGGAC CAATAAATGT AGTTGAGATA
CAAGGTATTC CAGGTGCATC AGCTACTAGA GATAGGGGAG AAGGATTCCA TAATATAATG
GATAAAAATG ATAAATTTAA TTTTATTTCA ATACAAGCTG CTGATTTTGA TAGACAAAAA
GGTCTTCAAG TTATGGAAAA TATAATCCAA GCTAATCCTA ATATACAAGT TGTATTTGCT
CATAATGATG AAATGGCTTT AGGGGCAGTT AAAGCAATTA AGGCTAGTGG AATAAATGCA
TTAGTTATAG GGTTCGATGG AAATGATGAT GCTAAAGATT CCATAGATGC TAATGAAATG
ACAGCTATAA TAGCTCAACA ACCAGATTTA ATTGGAGCAT TGGGAGTAGA ATTAGCTAAT
AAGATATATA AGGGTGAAAG CATTAAAAAT AAAATAGCAG CAGACCTTAA GGTATATACT
AAATAA
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| Protein sequence | MNINKKIFSV GLMLMMLMTS FIGCGRDNKP KIGMVLSTLN NPFFVNMKDG AEKEAEKLGY
DLVVLDSQND PAKERANVED LIQLGVIALL INPTDSDAVV KTVEVANKSN IPVITLDRQA
NGGKITSHIA SDNIKGGEMA AEYVLDKFKD EKGPINVVEI QGIPGASATR DRGEGFHNIM
DKNDKFNFIS IQAADFDRQK GLQVMENIIQ ANPNIQVVFA HNDEMALGAV KAIKASGINA
LVIGFDGNDD AKDSIDANEM TAIIAQQPDL IGALGVELAN KIYKGESIKN KIAADLKVYT
K
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