| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1572 |
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| Symbol | thiF |
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| ID | 4204625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1763175 |
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| End bp | 1763774 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566123 |
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| Product | thiamine biosynthesis protein ThiF |
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| Protein accession | YP_698888 |
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| Protein GI | 110802550 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
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| TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.109403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTATCTA GGCATACACC AGGTATTCAT GAAAAACTAA AAAAAATTAA GGTTTTAATA
GCTGGATGTG GAGGACTTGG ATCTAATATT GCTATTTCTT TAGGAAGAAT AGGGATTGGA
AGTATAAGTT TAGTAGATTT TGATATAGTA GAACCTTCTA ATTTAAATAG GCAGCAGTAT
TATATTGAGG ATATTGGAGA ATTTAAAGTA ATTGCTTTAA AAAGAAACTT AATTAGAATA
AATCCTTTTA TAAAAATAGA AGCTTTAAAT CTTAAGCTTT CTGAAGATAA TATGGGTATT
TTACAAGGAG CTGACATAAT AATAGAAGCC TTTGATAATC CAGATTATAA AGCCTTATTA
GCTAATTATG TTTTAAGTAA TATGAAGGAC AAATTTTTGA TTTCCTCTTC AGGAATGGCT
GGATTTTATG ATTCAAATTT AATAAAAACA AAGCAAATAA CGGATAAATT TTATATTTGT
GGAGATTTAG TAAATGAAGC TAAGGAAGGC TGTGGGTTAA TGGCTCCTAG AGTGGCTATA
TGTGCAAATC ACATGGCTAA TTTAGTTATA GATATAGCTG TTAATAAAAT AGAATTTTAA
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| Protein sequence | MVSRHTPGIH EKLKKIKVLI AGCGGLGSNI AISLGRIGIG SISLVDFDIV EPSNLNRQQY
YIEDIGEFKV IALKRNLIRI NPFIKIEALN LKLSEDNMGI LQGADIIIEA FDNPDYKALL
ANYVLSNMKD KFLISSSGMA GFYDSNLIKT KQITDKFYIC GDLVNEAKEG CGLMAPRVAI
CANHMANLVI DIAVNKIEF
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