| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1565 |
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| Symbol | |
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| ID | 4205284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1757951 |
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| End bp | 1759105 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566116 |
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| Product | ISCpe2, transposase orfB |
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| Protein accession | YP_698881 |
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| Protein GI | 110802097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATACCCAA CTAAGAAACA AGCCGAGCTA
ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA
ACTAAAGATA GTTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG
AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA
AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA
AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCAAACC TAAATTTAAG
TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTGG TAAAAGCTAA GGGTAATGTA
AATATTGAGA TAGTAGGTAA AGGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA
AATTCAAGAA ATGTAGATGG AAATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT
AAATATTTTG CATCTATTCT TTGTGATGTA AATACTCAAG AATTACCTAA AATAGATAAA
AAAGTTGGTG TAGATGTTGG ATTAAAAACT TTTGCTGTTT GCTCTGATGG ATATGAAGAA
GCTAATCCTA AACACTTTAG AAAGGCAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA
GCTCGTAAAG AATGTAACTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA
CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT
AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC
AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC
AAGGCTAAAT GGTATGGTAA AGAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA
CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ACCTAGGTCT AAGAGAATGG
ATATGTCCCG AATGTGGAAC ACACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA
AAGCTGATAG CTTAA
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| Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDSYWNIVE EMVQQGYFQE
NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKTGGKPKFK
SKKNEIQSYT TKLVKAKGNV NIEIVGKGIK LPKLGLVKIE NSRNVDGNIK RVTVSRTQSG
KYFASILCDV NTQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKAE KRLIKLQRDL
ARKECNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH
KLAKVISEAS WSEFRRMLEY KAKWYGKEIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW
ICPECGTHHQ RDLNASINLE KLIA
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