Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1553 |
Symbol | |
ID | 4205862 |
Type | misc_feature |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1741995 |
End bp | 1742816 |
Gene Length | 822 bp |
Protein Length | |
Translation table | |
GC content | 26% |
IMG OID | |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00072525 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGATA GTCAGAAAGA AGAGAGAAAA TTAAAGAGAA AATTATTTTT TAAATTCTTT AACTATAATT TTTTAAAGGA TAGAAATATA GAATATAAAG AATTTAAATA TGGTGACAAT AAAAGAGATT ACTATAGAGT ATATAAAGGC TATGATAAAA GAAAGCCTAC TATATTTTTT ATATATAGTG GAGGTTTATG GAATAGCAGC CCTAAAGGAT GTGCAGCTAT AGGCAAGTTT TTTTATAAAT ATGGATTTAC TGTAGTAATT CCATCCTATG AGCTAGCGCC AGAACATAAA TATCCAGTTT AAATGGAAAA TATATTTTCT GCATTTAAGC ACTATTTAGA AAATAATAAA CCTAATAGAA TAGTAGTTAT CGGGTATTCT TCAGGGGCAG ATTTAGCTGC AAACCTGATT TACAATAAAG ACATGAAAGA AAAGTTTCAT ATAGATACAG GCATAATATC TTCTTTTATA TCACTAGGAG GAACCTTAGA TTTTAGTCAA TGTAATTCTA AAGAATATAA AAAATATATA AAAAAATATT TATACGGAAA AGAACAGATT TTTAATGTTA ATCCAATAAA TTTACTAAAG GAGGATTCAC CTAAAATTCC AGTACTTTGC GTTCATGGTG CTAAGGATTC TATAGTTAGC TATGAAAATT CTAAAAGGTT TGTAGAAAAG GTAAATAAAT TTAAAGGAAA TGGAGAATTT TTAAAATTAG AGGGATATCA ACATTTAGAT TTGTTAAATT TATTTATAGG ATTAGGAAAT AAAAAAACAG GGGATATAAT GAGTTTTATT AATAGATTTT AA
|
Protein sequence | |
| |