| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1541 |
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| Symbol | |
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| ID | 4205112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1727153 |
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| End bp | 1727983 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566093 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_698858 |
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| Protein GI | 110803089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.145336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATA AATTAGTTTG TATAGATATG GATGGTACGC TTTTAGATTC TCATCACAGA
GTTAGTGAAA GAAATAAAGA GGCTTTAAAG AAAGCCATTG AAAAAGGAGT ACATATTGCC
ATATCAACAG GAAGGGTTTT TCCGTCAGCT AGAATATATG GGAATATAAT AGGAGTAAAT
GCACCATTAA TTTGTTCAAA TGGTTCATAT ATAAAGGATA AAAATACTGG TGAGTTAATA
TTTAAATCTA CACTAGACAG GGAAACTTAC TTTAAAATAT GTGATATTAT AAACAAATAT
AAGTTTTTAG CTTATGTAGA CTCTACAGAT GGACTAATAG CAGATACAGA TATTCCAGAG
GATGATAGTC ATAGACTTAT GAATAGCTGG GTAGATGAGG AAGAAAAAAT AAAATTCTAC
AAATATGATG ACTTAAGAGA TGCTTATGAT GAACATGGAG AAGATATATT AAAGTTCATA
ATAATAAAAA AAGAAGGTGG ACCTAATATA GAAGAAGCTA AGGAGGAATT TGAAGCCTTA
GAAGGAGTAG ATTTAGTTTA TGCTTCTTGG GGTGGATGTA TAGAGATCAT GAAAAAAGGA
ACTTCAAAGG GAAGTGCAGT TAAAGCCCTT GCAGATAAAT TAGGAATAAG CTTAGAAGAA
GTGATATGCA TTGGTGATAG TGGAAATGAT ATATCTATGC TAGAAGAGGC AGGATTATCT
GTAGTAATGG GAAATGCACC AGACTTTATT AAGGAATATG GAGATTATAT AACAGATACA
AATGAAAATG ATGGCGTTGC TAAGGCTATA GAGAAGTTTA TATTAGAGTA A
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| Protein sequence | MNYKLVCIDM DGTLLDSHHR VSERNKEALK KAIEKGVHIA ISTGRVFPSA RIYGNIIGVN
APLICSNGSY IKDKNTGELI FKSTLDRETY FKICDIINKY KFLAYVDSTD GLIADTDIPE
DDSHRLMNSW VDEEEKIKFY KYDDLRDAYD EHGEDILKFI IIKKEGGPNI EEAKEEFEAL
EGVDLVYASW GGCIEIMKKG TSKGSAVKAL ADKLGISLEE VICIGDSGND ISMLEEAGLS
VVMGNAPDFI KEYGDYITDT NENDGVAKAI EKFILE
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