Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1514 |
Symbol | |
ID | 4204783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1694779 |
End bp | 1695405 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566067 |
Product | hypothetical protein |
Protein accession | YP_698832 |
Protein GI | 110802240 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000468543 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA AAATAATAAA ATCATATTGG GGTGTTGAAT TAAGTCCAAG GTTTATTGAT GCTAGAAGTA AAAAGCTTTG TATAATATTA CCTGGAATAG GATATTGTTT AGATAGATCT TACTTAGATT ATTCTAAGCA ATTAGCAAAA GAAATAGGAT ATGATGTTCT AGAAATAGAA TATGGATATC AAATAAATAG AAGCGAATTT AATATTGAAA AAGAGTTTAG CATAATGGTT TCTGAGTCAT TAGAAGTTAT AGACAATGCC ATAGAAAAAG AATATGAAGA GATTTTAATA ATAGGAAAAA GTATTGGAAC AAGTGTACAG TCTTTTTTAA ATAAAGATTT AAGTGGAAGA TTTAAAAGTA TAAGAAATAT ATATATAAGC CCAATAAATA AGACTTTAGA TGAGTTTAAC ATAGAATCTA ATTCTTTAGT TATAACAGGA GATAAAGATC CATTATTAAG TATAGCTCAT AGAGTAGAGA TAGAAAAAAG AGAAGATATA GAAAGTTTTA TAATAGAAGG TGCAAATCAT GCTCTTGATA TAGAGGGAAA TGTTATGAAA ACCGTTGATG CTTTAAAAGA GTCTTTAGAA ATAGAAAAAG ACTTTATACT GAGATAA
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Protein sequence | MSNKIIKSYW GVELSPRFID ARSKKLCIIL PGIGYCLDRS YLDYSKQLAK EIGYDVLEIE YGYQINRSEF NIEKEFSIMV SESLEVIDNA IEKEYEEILI IGKSIGTSVQ SFLNKDLSGR FKSIRNIYIS PINKTLDEFN IESNSLVITG DKDPLLSIAH RVEIEKREDI ESFIIEGANH ALDIEGNVMK TVDALKESLE IEKDFILR
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