Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1473 |
Symbol | |
ID | 4206286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1649385 |
End bp | 1650146 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566027 |
Product | ISCpe7, transposase |
Protein accession | YP_698792 |
Protein GI | 110803646 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.804077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA CTAATATAAA ATGCCCTCGT TGTCATTCGG AAAAACTATA TAAGTTTGGA TTTGACAAGC AGGCTAATCA AAAATATCAA TGTAAAGAAT GTGGTAGACA ATTCGCGCCT GACTCCGTCA GTAGCCGTCC AAAGTCTAAG TACCCTAGAT GTCCTAAATG TAATAAAGCC ACATATCTTC ACCATAAATA CAAGCACTAT AATCGTTATA AATGTGGAAG CAGAAAGTGT AATCATGCTT TCTCTCAATA TCACAATTTA AACATAGATT TAGCTTCAAG TGAGAATTTA ACCGGGTCCC TTTCTATGAA AGGAATGCGT TTTCCACTTC ACACGATACT TACAGCTTTA ACCTTATATT TTTTAAATAA TACTTCAACT AGAGCAATTT CTCAATTTTT AAAAGTAACA TCTAATATCT CGGTTTCACA TGTTACTATA TCTAGTTGGG TACATAAATT TGCACCTTAT TTTAAAGAAA AAGCTAAGAT ATTTAACGCT CAATTAGATT TAAATTCTGA TGATTGGCAT GCCGATGAAA CCGTGGTGTT TATAAGCGGT AAAAAATATT ATCTATGGCT TGCTATAGAC TCTGAAACAC GTTTTGTGTT AGCTTTTCAT CTAACACAAG CACGTGATTC TGATGCAGCA TTTATTCTTA TGAATCAAGC TAAATCTATG GGTAAACCTA ATAACTTTAT CACAGATAGA CTACCGTCCT ATAATGAAGC AGTTAAAACC GTATTAGACT AA
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Protein sequence | MNKTNIKCPR CHSEKLYKFG FDKQANQKYQ CKECGRQFAP DSVSSRPKSK YPRCPKCNKA TYLHHKYKHY NRYKCGSRKC NHAFSQYHNL NIDLASSENL TGSLSMKGMR FPLHTILTAL TLYFLNNTST RAISQFLKVT SNISVSHVTI SSWVHKFAPY FKEKAKIFNA QLDLNSDDWH ADETVVFISG KKYYLWLAID SETRFVLAFH LTQARDSDAA FILMNQAKSM GKPNNFITDR LPSYNEAVKT VLD
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