Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1376 |
Symbol | |
ID | 4206080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1547838 |
End bp | 1548434 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642565930 |
Product | hypothetical protein |
Protein accession | YP_698695 |
Protein GI | 110803830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000306259 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTATA AAACTCATCT TGAAATAGGA GAAAATACAT TTAATACTAT TGAAGGAAGA GGAAGAAATT TAATTGATAA AAAAAGTTTT TTAAAAGGAA ATATTCTTCC AGATATTTCA CCTAAATATA GATTGAAAAA ACATGGAAGA AAACAGTTTG AAGAGATTAT TGATGAAAAG GTAAAAGCGC TAAGTAGGTT AAGTAGTGAT GAAATAATAA ATCATTTAGG AAAAGAAAAA TTTAGTATAG AGTTAGGAGT AGTGTGTCAT TTTTTATGTG ACTTTTTTTC TTTGCCTCAT GATGAGGAAT GGAGTTTTAA GGAGAGTGTA ACCTTAAAGC ATGTGTTATA TGAGAAAAAG TTACATAAGG TTTTTAGTAA AGATATAATA ATAAAAGATA GTTATAAAAT ACTAGGAAAC TCAGATTATG ATGTCTTTTT TAAAAATGCT TTAAAGAAAT ATAGAAATGT ATATGGATAT AGAAATGATC TGTTTTTTGC AATGTATTTA AATAATTCAG TTGTTAGATA TGTTTTAGAA TCCATAGAAG AAAATGATAA AATAAATCTT TCAAAAGAAA AAGATATTGC TTTTTAA
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Protein sequence | MLYKTHLEIG ENTFNTIEGR GRNLIDKKSF LKGNILPDIS PKYRLKKHGR KQFEEIIDEK VKALSRLSSD EIINHLGKEK FSIELGVVCH FLCDFFSLPH DEEWSFKESV TLKHVLYEKK LHKVFSKDII IKDSYKILGN SDYDVFFKNA LKKYRNVYGY RNDLFFAMYL NNSVVRYVLE SIEENDKINL SKEKDIAF
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