Gene CPR_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1376 
Symbol 
ID4206080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1547838 
End bp1548434 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content24% 
IMG OID642565930 
Producthypothetical protein 
Protein accessionYP_698695 
Protein GI110803830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000306259 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTATA AAACTCATCT TGAAATAGGA GAAAATACAT TTAATACTAT TGAAGGAAGA 
GGAAGAAATT TAATTGATAA AAAAAGTTTT TTAAAAGGAA ATATTCTTCC AGATATTTCA
CCTAAATATA GATTGAAAAA ACATGGAAGA AAACAGTTTG AAGAGATTAT TGATGAAAAG
GTAAAAGCGC TAAGTAGGTT AAGTAGTGAT GAAATAATAA ATCATTTAGG AAAAGAAAAA
TTTAGTATAG AGTTAGGAGT AGTGTGTCAT TTTTTATGTG ACTTTTTTTC TTTGCCTCAT
GATGAGGAAT GGAGTTTTAA GGAGAGTGTA ACCTTAAAGC ATGTGTTATA TGAGAAAAAG
TTACATAAGG TTTTTAGTAA AGATATAATA ATAAAAGATA GTTATAAAAT ACTAGGAAAC
TCAGATTATG ATGTCTTTTT TAAAAATGCT TTAAAGAAAT ATAGAAATGT ATATGGATAT
AGAAATGATC TGTTTTTTGC AATGTATTTA AATAATTCAG TTGTTAGATA TGTTTTAGAA
TCCATAGAAG AAAATGATAA AATAAATCTT TCAAAAGAAA AAGATATTGC TTTTTAA
 
Protein sequence
MLYKTHLEIG ENTFNTIEGR GRNLIDKKSF LKGNILPDIS PKYRLKKHGR KQFEEIIDEK 
VKALSRLSSD EIINHLGKEK FSIELGVVCH FLCDFFSLPH DEEWSFKESV TLKHVLYEKK
LHKVFSKDII IKDSYKILGN SDYDVFFKNA LKKYRNVYGY RNDLFFAMYL NNSVVRYVLE
SIEENDKINL SKEKDIAF