Gene CPR_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1356 
Symbol 
ID4205066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1529251 
End bp1529736 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content30% 
IMG OID642565910 
ProductybaK/ebsC protein 
Protein accessionYP_698676 
Protein GI110801708 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00173308 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG ATAAGAAGCT TAAGACAAAT GCTATGAGAA TATTAGATTC TAAAAAGGTT 
TCATATGAAA TGTTAAGTTA TGAAAGTGAA GATGGAAAGA TAGATGGAAT TTCTGTAGCT 
CATAAAATTG GAGTAGATGA GAAAAATGTA TTTAAAACAT TGGTAGCTCA AGGAACAAGC 
AAAGAGCTTT ATGTTTTTGT TATACCAGTT GCAGAAGAAT TAGATTTAAA AAATGCTGCT 
AAGATAGCTG GAGAAAAGAA AGTTGAAATG ATAGCAGTTA AGGATATAAT GAAATATACT 
GGATATATTC GTGGTGGATG TTCCCCTATA GGAATGAAAA AGAATTATAA AACCTTTATA 
CATGAGAGCG CAGAAGATTT AGATTTTATA ATATTTAGTG CAGGGAAGAT AGGACATCAA 
ATAAAAATGA ATCCAAAAGA CTTAGTAAGT GTTGTAGAAG GGGAATTTGC ATTTTTAATA 
AAATAG
 
Protein sequence
MAKDKKLKTN AMRILDSKKV SYEMLSYESE DGKIDGISVA HKIGVDEKNV FKTLVAQGTS 
KELYVFVIPV AEELDLKNAA KIAGEKKVEM IAVKDIMKYT GYIRGGCSPI GMKKNYKTFI 
HESAEDLDFI IFSAGKIGHQ IKMNPKDLVS VVEGEFAFLI K