Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1332 |
Symbol | |
ID | 4205548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1501156 |
End bp | 1502505 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565886 |
Product | stage V sporulation protein R |
Protein accession | YP_698652 |
Protein GI | 110802977 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0448775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATA ATTTAAAAGA TTTAGAAGGA TGGAACAATA AGATAGAAGA AATAGCAAAG AGTGAAGGGT TAGATTATTA TCCTCAGGAA TATGAAATTA TAGGTTATAA TGAAATGCTA AGTTATGAAG CATATGTAGG AATGCCTTCT AAATATCCAC ATTGGAGTTA TGGTAAGGCT TATGAAAAGA ATAAAACTTT ATATTCATTA AATATGACAG GATTACCATA TGAGATGGTT ATAAATTCTA ATCCTTGCCT AGCTTATTTA ATGAAGGATA ATACTTTATT GCTTCAAATA TTAACTATGG CTCATGTATA TGGTCATAAT GATTTTTTTA AAAATAATAG ATTGTTTAAA AAAGGAACAG ATGCAAATAA TGCTTTAGAA ATGTTTAAGC TAGATGCAGA TACTATAAGA GGATATATAA ATGATCCAAG TATAGGTTAT AGCCAAGTTG AAAGAATATT AGATTCTGCT CAATCCATAA GATATCAAGT GCCAAGGGTT ATAGGTGAAA AGAGGGAGTC GCAAGATGAG CAGAGAAAAA GAGTATTAGA GATATTCAAT AAGAAAAAAG AAAATAGGGG TATTTTAGAC TCTATGGAAG AAATACTTCC TCCTGATATA AGTAAAATTC CACTTAATCC AGATGATGAT ATTATTCAGT TTATAATAGA TTATAGTAAT TTAGAAGAGT GGGAAAAAAA TATTCTAAAA ATAGTTAGAA GAGAGAGCTT ATACTTTTTA CCACAAATAG AGACTAAGAT AATGAATGAA GGCTGGGCAA GTTATTGGCA TTATAATATT TTGAAAAAGT TAAATTTACC ACAGGGACTT CATTTAGAGT TTTTAAAAAG ACATAATGAT GTTGTGGCTC CTGTTTCTTA TGGACTTAAC CCTTATTATA TAGGTTTTAG AATTTTTCAG GATATAGAAA AAAGGTATGG CAAAGAAAAA ATCTTTGAAG TAAGAGCATT AGAAAGAGAT AATTCCTTTA TAAGAAAATA TTTAACTAGG GAGCTTTGTG AGGAGCTTAA TTTATTCCAG TATGTTAAAA AGGGATTTGA TTATGTTGTA GAGGAAGTTT CTGATGATTT AGGATGGAAG AGTATTAGGA ATCTTATTGC AGATGAATGC GGTGTAAGCT CTATTCCACA TATTAGAGTT AGGGAGCTAA ATAAAAAAGA TATGACTTTA AATTTAGAGC ATGTTTTTGA TGGAAGAGAA TTAGAAGCTA ATTATGCAAA GAAAACCTTA AAGTATATAA ATATTTTATG GGGAAGAAAG GTAAATTTAA GCAGTAAGGG GAAAGATGGA TCAGATATAT TATTTATGTG TGATGAATAG
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Protein sequence | MDYNLKDLEG WNNKIEEIAK SEGLDYYPQE YEIIGYNEML SYEAYVGMPS KYPHWSYGKA YEKNKTLYSL NMTGLPYEMV INSNPCLAYL MKDNTLLLQI LTMAHVYGHN DFFKNNRLFK KGTDANNALE MFKLDADTIR GYINDPSIGY SQVERILDSA QSIRYQVPRV IGEKRESQDE QRKRVLEIFN KKKENRGILD SMEEILPPDI SKIPLNPDDD IIQFIIDYSN LEEWEKNILK IVRRESLYFL PQIETKIMNE GWASYWHYNI LKKLNLPQGL HLEFLKRHND VVAPVSYGLN PYYIGFRIFQ DIEKRYGKEK IFEVRALERD NSFIRKYLTR ELCEELNLFQ YVKKGFDYVV EEVSDDLGWK SIRNLIADEC GVSSIPHIRV RELNKKDMTL NLEHVFDGRE LEANYAKKTL KYINILWGRK VNLSSKGKDG SDILFMCDE
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