Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1298 |
Symbol | gpmI |
ID | 4206273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1467633 |
End bp | 1469171 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642565854 |
Product | phosphoglyceromutase |
Protein accession | YP_698620 |
Protein GI | 110803633 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0696] Phosphoglyceromutase |
TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00238199 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAA AACCTGTAAT GTTAATGATA TTAGACGGAT TTGGAATTTC TCCAAACAAA GAAGGTAATG CAGTAGCTGC TGCTAATAAA CCAAATTATG ATAGATTATT TAATAAATAT CCACACACTG AATTACAAGC TTCAGGATTA GAAGTTGGTC TTCCAGAAGG ACAAATGGGT AACTCAGAGG TTGGTCATTT AAATATAGGT GCTGGTAGAA TAATATACCA AGAGTTAACT AGAATAACTA AAGAAATAAA AGAAGGAACT TTTTTTACAA ATAAAGCTTT AGTTAAGGCT ATGGATGAAG CTAAAGAAAA TAATACTTCA TTACACTTAA TGGGATTATT ATCAAACGGA GGGGTTCACT CTCACATAGA TCACTTAAAA GGTCTTTTAG AGTTAGCTAA GAAAAAAGGA CTTCAAAAAG TTTACGTTCA TGCTTTCATG GATGGTAGAG ACGTTGCTCC ATCATCAGGT AAAGAATTCA TAGTTGAATT AGAAAATGCT ATGAAGGAAA TTGGTGTTGG TGAAATAGCT ACTATAAGTG GTAGATATTA CGCAATGGAC AGAGATAACA GATGGGAAAG AGTAGAATTA GCTTATAACG CTATGGTTTT AGGAGAAGGT GAAAAAGCTT CTTCAGCTGT TGAAGCTATA GAAAAATCTT ACCATGATAA CAAAACTGAC GAGTTCGTTT TACCTACAGT AATTGAAGAA GATGGACACC CAGTTTCTAG AATTAAAGAT GGAGATTCAG TAATATTCTT CAACTTTAGA CCAGATAGAG CTAGAGAAAT AACTAGAGCT ATAGTTGATC CAGAATTCAA AGGATTTGAA AGAAAGCAAT TACACGTAAA CTTTGTTTGT ATGACTCAAT ATGACAAAAC TTTAGAGTGT GTAGATGTTG CTTACAGACC AGAAAATTAC ACAAATACTT TAGGAGAATA TGTTGCGTCT AAAGGATTAA ACCAATTAAG AATTGCTGAA ACTGAAAAAT ATGCTCACGT AACATTCTTC TTTAACGGTG GAGTAGAACA ACCAAACACT AATGAAGATA GAGCATTAAT AGCTTCACCA AAGGTTGCTA CATACGATCT TAAACCAGAA ATGAGTGCTT ATGAAGTAAC TGATGAATTA ATAAAGAGAT TAGATGAAGA TAAATATGAC ATGATAATAT TAAACTTCGC TAACCCAGAT ATGGTTGGAC ATACTGGAGT ACAAGAAGCA GCTGTTAAAG CTATAGAAGC AGTTGATGAG TGCTTAGGAA AAGTAGCTGA TAAGGTATTA GAAAAAGAAG GTACTTTATT CATAACTGCT GACCATGGTA ATGCAGAAGT AATGATAGAT TACTCAACTG GTAAACCAAT GACTGCTCAT ACTTCAGATC CAGTTCCATT CTTATGGATA TCAAAAGATG CTGAAGGAAA ATCATTAAAA GATGGTGGGA AATTAGCTGA TATAGCTCCA ACTATGTTAA CTGTTATGGG ATTAGAAGTT CCATCAGAAA TGACTGGAAC ATGTCTTTTA AACAAATAA
|
Protein sequence | MSKKPVMLMI LDGFGISPNK EGNAVAAANK PNYDRLFNKY PHTELQASGL EVGLPEGQMG NSEVGHLNIG AGRIIYQELT RITKEIKEGT FFTNKALVKA MDEAKENNTS LHLMGLLSNG GVHSHIDHLK GLLELAKKKG LQKVYVHAFM DGRDVAPSSG KEFIVELENA MKEIGVGEIA TISGRYYAMD RDNRWERVEL AYNAMVLGEG EKASSAVEAI EKSYHDNKTD EFVLPTVIEE DGHPVSRIKD GDSVIFFNFR PDRAREITRA IVDPEFKGFE RKQLHVNFVC MTQYDKTLEC VDVAYRPENY TNTLGEYVAS KGLNQLRIAE TEKYAHVTFF FNGGVEQPNT NEDRALIASP KVATYDLKPE MSAYEVTDEL IKRLDEDKYD MIILNFANPD MVGHTGVQEA AVKAIEAVDE CLGKVADKVL EKEGTLFITA DHGNAEVMID YSTGKPMTAH TSDPVPFLWI SKDAEGKSLK DGGKLADIAP TMLTVMGLEV PSEMTGTCLL NK
|
| |