Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1281 |
Symbol | |
ID | 4205948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1448374 |
End bp | 1449555 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565837 |
Product | pyrimidine nucleoside transporter |
Protein accession | YP_698603 |
Protein GI | 110803969 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00013711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA TTATTGGAGT TGTAGGATTA ATTGTTATTT TAGCACTTGC GTGGATTGGA AGTAGTGATA AGAAAAATAT AAAATATAAG CCTATATTTT TAATGCTTAT TTTACAATTC GTATTAGGAT TTATACTTTT AAATACTCAA GTTGGAAATT ATTTAGTTGG AAGTATAGCA AATGGGTTTC AACTTCTTCT AGATTGTGCT GGAGATGGGG TAAATTTTGT ATTTGGTGGA TTAGTTAATA ATAATCAATT TTCATTCTTT ATTAGTGTTC TTTTACCAAT AATCTTTATT TCTGCCTTAA TTGGTATTTT ACAATACTTG AAAATACTTC CTTTTGTAAT TAAATACATA GGTTTAGTTT TAAGTAAAAT TAATGGCATG GGTAAATTAG AGTCTTATAA TGCTGTGGCA TCAGCTATAC TTGGTCAATC AGAAGTATTT ATTTCTGTAA AAAAAGAACT TGGTTTATTA CCTAAACATA GATTATATAC TTTGTGTGCA TCAGCAATGT CAACAGTATC TATGTCTATA GTTGGTTCTT ACATGGTTTT ATTACAACCT AGATATGTTG TAACAGCAAT TGTTCTTAAT TTATTTGGTG GATTCATTAT AGCATCAGTT ATAAATCCAT ATTCTGTATC TAAAGAAGAG GATATTTTAG TAGTTGAAGA CGAAAAGAAA CAAACATTCT TTGAAGTGCT TGGTGAATAT ATTTTAGATG GATTTAAGGT AGCAGTTATA GTAGCAGCTA TGTTAGTTGG ATTTGTAGCA ATTATTGCTG TAATAAACAT GATATTTAGA GCAATCTTTG GAATGAGCTT CCAAGATATA CTAGGATACG TATTCTCACC TTTTGCATTC TTAATGGGTG TACCTTTAAA TGAGTCAATA CAAGCAGCCA GTGTAATGGC AACAAAGCTA GTATCTAATG AGTTTGTTGC AATGAATTTA TTATCAAGTG GAAATTTAAA TTTATCAGCA AGATCAATTG GTATTGTTTC TGTATTTTTA ATTTCTTTTG CAAATTTCTC ATCAATTGGA ATTATTTCAG GAGCAGTAAA AGGGCTTAAC CAAGAACAAG GAAATGTGGT TGCACGTTTC GGACTTAAAT TACTATATGG TGCAACATTA GTAAGTATGT TAACAGCAAC TATTGTTGGA TTAATTATAT AA
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Protein sequence | MKYIIGVVGL IVILALAWIG SSDKKNIKYK PIFLMLILQF VLGFILLNTQ VGNYLVGSIA NGFQLLLDCA GDGVNFVFGG LVNNNQFSFF ISVLLPIIFI SALIGILQYL KILPFVIKYI GLVLSKINGM GKLESYNAVA SAILGQSEVF ISVKKELGLL PKHRLYTLCA SAMSTVSMSI VGSYMVLLQP RYVVTAIVLN LFGGFIIASV INPYSVSKEE DILVVEDEKK QTFFEVLGEY ILDGFKVAVI VAAMLVGFVA IIAVINMIFR AIFGMSFQDI LGYVFSPFAF LMGVPLNESI QAASVMATKL VSNEFVAMNL LSSGNLNLSA RSIGIVSVFL ISFANFSSIG IISGAVKGLN QEQGNVVARF GLKLLYGATL VSMLTATIVG LII
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