Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1234 |
Symbol | cobJ |
ID | 4205480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1387343 |
End bp | 1388065 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565790 |
Product | precorrin-3B C17-methyltransferase |
Protein accession | YP_698556 |
Protein GI | 110802195 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1010] Precorrin-3B methylase |
TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0777573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAT TATATGTAAT TGGAATTGGA CCAGGTGGAT TAGATGAAAT GACTTTAAGA GCAGTTAAAG CTATTGAAGA ATCTGACATA ATAGTTGGGT ACACTAAATA TATAGAAATG GTTAAAGACT TAATAAAAGA TAAGGAAATC TTCAAAACTG GTATGCGTGG AGAAGAAGAA AGATGCAGAG AAGCCTTAGA ACTTAGTAAG GATAAAAAAG TTGCTTTAAT AAGTACTGGA GATTCAGGAA TTTATGGTAT GGCTGGACTT ATCTTAGAGA TGAGAAAAGA TGAAAATGTT GAAATAATAC CTGGTATTAC AGCATCTAGT GCAGCAGGAT CAGTTTTAGG TGCTCCTTTA ATGCATGATA ACTGTAACAT AAGTTTAAGT GATTTAATGA CTCCTTATGA AGATATAAAG AAAAGAGTTC GTTTAGCAGC AGAGGGAGAT TTCGTAATTT CTCTTTACAA TCCAAAGAGT AAAGGAAGAC CACACTATTT AAGAGAGTGT GTTGATATAA TTAAGGAATT TAGAGGAGAA GAAACTCCTA TAGCAGTTGT TAGAAATGCC TTAAGAGAAG GAGAAAGTAA AGAAATATTT ACTTTAAAAG ACTTTAATGA TGAAGTAGTT GATATGTTCT CAATAGTAAT CATAGGAAAC TCAAAAAGTT ATATTAAAGA TGGATATTTT GTAACTCCAA GAGGATATAA AATAAAAAAA TAA
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Protein sequence | MGKLYVIGIG PGGLDEMTLR AVKAIEESDI IVGYTKYIEM VKDLIKDKEI FKTGMRGEEE RCREALELSK DKKVALISTG DSGIYGMAGL ILEMRKDENV EIIPGITASS AAGSVLGAPL MHDNCNISLS DLMTPYEDIK KRVRLAAEGD FVISLYNPKS KGRPHYLREC VDIIKEFRGE ETPIAVVRNA LREGESKEIF TLKDFNDEVV DMFSIVIIGN SKSYIKDGYF VTPRGYKIKK
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