Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1192 |
Symbol | xth |
ID | 4205559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1339798 |
End bp | 1340550 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565748 |
Product | exodeoxyribonuclease III |
Protein accession | YP_698514 |
Protein GI | 110802988 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0173462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TATCATGGAA TGTTAATGGC TTAAGAGCTT GTGTTAAAAA AGGCTTTTTA GATTACTTTA AATCTGAAGA TGCTGATATA TTCTGTCTAC AGGAGACTAA ACTTCAGGAA GGACAAATAG ATTTAGATCT AGAGGGATAT CATCAATACT GGAACTATGC TGAGAAAAAG GGGTATTCAG GAACTGCAAT ATTCACTAAA AAAGAACCTC TAAATGTTTA TTATGGAATA AATATGGAGC ATCATGATAA AGAAGGAAGA GTTATAACTT TAGAATTTGA AGACTTCTTT ATGGTAACTG TTTATACTCC AAATTCACAA AGTGAACTTG CCAGATTAGA GTATAGAATG GAATGGGAGG ATGATTTTAG AAATTATCTT TTAGAACTTT CATCTAAAAA GGGAGTAGTT GTATGTGGAG ATTTAAATGT AGCTCATAAG GAGATAGATT TAAAGAATCC TAAGACAAAT AGAAAAAATG CTGGTTTTAC AGATGAGGAA AGAGATAAAT TTTCTACATT ATTATCAAGT GGGTTTATAG ATACTTTCCG TTATTTCAAC CCAGACTTAG AGGGGATTTA TTCTTGGTGG TCATATAGAT TTAATGCAAG AAAAAATAAT GCTGGATGGA GAATTGACTA TTTCTTAGTT TCAAATAATT TAGAAGATAG AATAAAAGAA GCTTCTATAG ATACTGAAAT ACTAGGATCT GATCACTGTC CTGTTAAACT AATAATGGAA TAG
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Protein sequence | MKLISWNVNG LRACVKKGFL DYFKSEDADI FCLQETKLQE GQIDLDLEGY HQYWNYAEKK GYSGTAIFTK KEPLNVYYGI NMEHHDKEGR VITLEFEDFF MVTVYTPNSQ SELARLEYRM EWEDDFRNYL LELSSKKGVV VCGDLNVAHK EIDLKNPKTN RKNAGFTDEE RDKFSTLLSS GFIDTFRYFN PDLEGIYSWW SYRFNARKNN AGWRIDYFLV SNNLEDRIKE ASIDTEILGS DHCPVKLIME
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