Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1157 |
Symbol | |
ID | 4206081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1302308 |
End bp | 1303921 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565713 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_698479 |
Protein GI | 110803831 |
COG category | [S] Function unknown |
COG ID | [COG1892] Uncharacterized protein conserved in archaea |
TIGRFAM ID | [TIGR02751] phosphoenolpyruvate carboxylase, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00340367 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAC CTTGTTCTAT GATGACTCAA CATCCGGATA ATGTAGAAAC TTATATTTCA ATACAACAAG AACCAGCAGA AGCAATAAAA GGATTAACAC CACAAGATAA AGGTGGTTTA GGAATAGAAG AAGTTATGAT AGATTTTGAA GGAAAGTTAA CACCTTACCA TCAAACATCA CAAATAGCAT TAGGATTAAT TTCAAATGGT ATAATTCCAG GAAAAGACGT TAGAGTAACT CCTAGAATAC CTAATGCAAA TAAAGAATCA GTATTTAGAC AACTTATGAG TATAATGTCT ATAATTGAAA CAAATGTTCA ATCAAAAGAA TTAACTGGAA CTCTAGCTAT TTCAGAGGTT GTTGTTCCTA TGATTGAAAC TGGTAAAGAA ATTTCAGAGT TTCAAGATAG AGTTAACTCA GTAGTTGATA TGGGGAATAA AAACTACAAA ACTAAATTAG ATTTAAATAG TGTTAGAATA ATACCTCTAG TTGAGGATGT ACCTGCACTA GTAAATATAG ATAGAATATT AGATGAACAT TATCAAATAG AAAAGAGTAA AGGACATGTT TTAAAAGATC TTAGAATAAT GATAGCAAGA TCTGATACTG CTATGTCTTA CGGATTAATT TCAGGAGTTT TATCAGTTCT TATGGCAGTT GATGGAGCTT ATAAATGGGG AGAAAAACAT GGTGTAACTA TAAGCCCAAT CTTAGGTTGT GGATCACTTC CATTTAGAGG ACATTTCTCA GAAGAAAACA TAGATGAAAT CCTTGCTACA TATAGTGGAA TTAAAACTTT CACATTTCAA TCTGCTTTAA GATATGATCA TGGTGAAGAA GCAACTAAAC ATACAGTTAA TGAATTAAAA GCAAAAATTG AGGAATCAAA ACCTAGAAAC TTTAGTGAAG AAGATAAAGA TTTAATGAAA GAATTCATAG GAATCTGTTC AAAACATTAT CTTCAAACAT TCTTAAAGGT AATAGATACA GTTTCATTTG TATCTGACTT TATTCCTAAG AATAGAGATA GATTAACAAA AGCTAAAACT GGATTAGAAT ATAATAGAGA AGTAGCAAAC TTAGACAATG TAGCAGATTT AGTTAAGGAT GAAGTATTAA AACAAGAAAT TCTTAGCATA GATAACTCAA AAGAATATGC AGTTCCAAGA GCTATATCAT TTACTGGGGC CATGTACACA TTAGGAATGC CACCTGAACT TATGGGAATG GGTAGAGCAT TAAATGAAAT AAAAACTAAG TATGGTCAAG AAGGTATAGA TAAACTTTTA GAAATATACC CAATCTTAAG AAAAGACTTA GCATTTGCTG CTAGATTTGC AAATGGAGGA GTTTCTAAGA AGATAATAGA TGAAGAGGCT AGACAAGAAT ATAAAGAAGA CATGAAATAT GTAAATGAAA TTCTTAACCT TGGATTAGAT TATGATTTCT TAAACGAAAA TGAATTCTAT CATACTTTAC TTAAAACTAC AAAGCCTATA ATTATGCACC TTATGGGACT TGAGGAAAAT GTAATGCGTA ACAGCACAGA AGAACTTAAA ATCCTAAATG AGTGGATAGT AAGAATGGGT AAAGTAAGAG GAAGTATAGG ATAA
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Protein sequence | MKIPCSMMTQ HPDNVETYIS IQQEPAEAIK GLTPQDKGGL GIEEVMIDFE GKLTPYHQTS QIALGLISNG IIPGKDVRVT PRIPNANKES VFRQLMSIMS IIETNVQSKE LTGTLAISEV VVPMIETGKE ISEFQDRVNS VVDMGNKNYK TKLDLNSVRI IPLVEDVPAL VNIDRILDEH YQIEKSKGHV LKDLRIMIAR SDTAMSYGLI SGVLSVLMAV DGAYKWGEKH GVTISPILGC GSLPFRGHFS EENIDEILAT YSGIKTFTFQ SALRYDHGEE ATKHTVNELK AKIEESKPRN FSEEDKDLMK EFIGICSKHY LQTFLKVIDT VSFVSDFIPK NRDRLTKAKT GLEYNREVAN LDNVADLVKD EVLKQEILSI DNSKEYAVPR AISFTGAMYT LGMPPELMGM GRALNEIKTK YGQEGIDKLL EIYPILRKDL AFAARFANGG VSKKIIDEEA RQEYKEDMKY VNEILNLGLD YDFLNENEFY HTLLKTTKPI IMHLMGLEEN VMRNSTEELK ILNEWIVRMG KVRGSIG
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