| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1107 |
|---|
| Symbol | |
|---|
| ID | 4204158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1252475 |
|---|
| End bp | 1253275 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 642565663 |
|---|
| Product | choline/ethanolamine kinase family protein |
|---|
| Protein accession | YP_698429 |
|---|
| Protein GI | 110803516 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.531729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACA AAATGAAAAA TCATAAGATA ACCAAACTAG GCGGTCTTAA TAACTCAAAT
TATTTATTAG AGTGTGAAAA TAATAAATAT GTTTTAAGAA TACCTAGTAA AGATAATAAA
AATAATTTTT CAGAGGAAAA TTTTGTTTTA ATATTTGCTA ATTTGAACAA GCTATCCCCC
CCTATTATAT ATCATAATAA GGATAATGGA ATACTAATAA GCAAATTTTT AGAAGATTCA
AAGGTAAATA TGAGTACATT TACATCTTTA GAATTCCTCG AAAAACTCTC AATTAATTTA
AGAAAACTAC ATATACTTAA GTGTGAACAT ATTTTTAACC CTTTTGAACA TATAAGAAAA
AATTTTCATA TTTTAAAATC TAAAAACTTT AATTTTCATC AAGATATTGA TTTAGTCTTA
AATAAATTAA ATATTCTTGA AGAAAAATTA AGCAAAAATA TGACTATTGG CCTTTGTCAT
AATGATTTAA ATTCTTCAAA TGTACTATAT TATAATAAAA ATGTTCTTTT TATTGATTTT
GAATTTTCTG CTATGTGTGA TATATTTTTT GATTTAGCTA CTGTATCTTG GATGCTTGAT
GAAAAGAAGA GGTATTTTTT AATAAAAAGT TATTTTGGCT ACTACTCTTA TGAATTAATG
GAAAAATTAG AAAATTATCT TTTCGTAGTT AAGCTTTGGA ATGCTTCTTG GAGCTTCTTG
AAGTCTTTAA ATACTAATTC TACATATGAT TATAAATTAG GTGGAAATAT GATCATAGAT
GATTTATTAT CCACTCTTTA A
|
|---|
| Protein sequence | MTNKMKNHKI TKLGGLNNSN YLLECENNKY VLRIPSKDNK NNFSEENFVL IFANLNKLSP
PIIYHNKDNG ILISKFLEDS KVNMSTFTSL EFLEKLSINL RKLHILKCEH IFNPFEHIRK
NFHILKSKNF NFHQDIDLVL NKLNILEEKL SKNMTIGLCH NDLNSSNVLY YNKNVLFIDF
EFSAMCDIFF DLATVSWMLD EKKRYFLIKS YFGYYSYELM EKLENYLFVV KLWNASWSFL
KSLNTNSTYD YKLGGNMIID DLLSTL
|
|---|
| |