| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1097 |
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| Symbol | |
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| ID | 4204260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1242324 |
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| End bp | 1242797 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565653 |
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| Product | HDIG/HD domain-containing protein |
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| Protein accession | YP_698419 |
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| Protein GI | 110803388 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0043379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGAGAA TAAATAAGAT ACTTAATAAT AGTAAGTATA AAGATTATTT AAATAGGAAT
TCTTTTTGTG AAAAGGATAG GGTTTTTTGC AAACATAACT TAGAGCATTT TTTAGATGTA
TCAAGGATTG CCTACATAAT GGTCTTAGAG GAAAATATGA ATGTACCTAA GGAAATTATA
TATGCAATAG GACTTCTCCA TGATATAGGA CGATGGGTAG AATATGAAGG TGGAGAAAAA
CATAATAAGG CTTCTTATAA ATTGAGTTTG GATATTTTAA AGGAATGTGA TTTTAATAAA
GAGGAAATAG AGATTGTTTT AAGTGGAATT TTAAATCACA GAAATAGTGA AGCAGAAGGA
TTAGATAAAA TTATTTACTT AGCTGATAAA AAATCAAGAA GCTGTTTTTT ATGTAATGCT
GAAAAACTTT GTAAGTGGAG CAAAGAAAAA AAGAATTTAG ATATAATTAT TTAA
|
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| Protein sequence | MERINKILNN SKYKDYLNRN SFCEKDRVFC KHNLEHFLDV SRIAYIMVLE ENMNVPKEII
YAIGLLHDIG RWVEYEGGEK HNKASYKLSL DILKECDFNK EEIEIVLSGI LNHRNSEAEG
LDKIIYLADK KSRSCFLCNA EKLCKWSKEK KNLDIII
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