| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1076 |
|---|
| Symbol | |
|---|
| ID | 4205402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1223066 |
|---|
| End bp | 1224472 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565632 |
|---|
| Product | putative aminopeptidase 1 |
|---|
| Protein accession | YP_698398 |
|---|
| Protein GI | 110802137 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1362] Aspartyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATG TAAAAGTTTT AAAAAAAGAA TATGAAAATG CTTGGACTAA ATATGAAGAG
GCAGATTTAA AACAGGTATT TTCATTAAGT GATAGATATA GGGAGTTCAT GTCAGTTGCT
AAAACTGAAA GAGAATGTGT TAAGGTTTTA GCTAATATGG CAGAAAGTAA AGGGTTTAAA
AATTTTTATG AAGTTATTAA AAATGGAGAA AAAGTGACAG CTGGGGATAA ACTTTATTCT
ATAAACATGG ATAAAACAAT AACTTTAATA AAAGTAGGTT CAGAACCATT AGAAAATGGA
TTAAGAATAA TAGGAGCTCA CATAGATTCT CCAAGAATAG ATGTTAAACA AAATCCATTA
TATGAAGATT CAGGATTAGC ATTATTAGAT ACTCATTATT ACGGAGGAGT AAAAAAATAT
CAATGGGTAA CTATACCTCT TGCAATACAT GGAGTTGTTG TAAAAAAAGA TGGAACTAGG
GTAGATATTA AAATAGGAGA AGATGAAAAT GATCCTGTTT TAGGAATTTC AGATCTTTTA
ATCCATTTAT CAGCAGATCA ATTAGATAAA AAAGGAGCTA AAGTAGTAGA AGGAGAAGAC
CTAAATATTT TAGTTGGAAG TATGCCATTA AAAGGAACTG AGGAAAAAGA GGCTGTTAAA
GCTAATATAT TAGTTTTATT AAATGAAAAA TATGGCATAA CTGAGGAAGA TTTTGTATCA
GCTGAGTTAG AAGTAGTTCC TGCTGGTAAG GCAAGAGATT ATGGATTAGA TAGAAGTATG
ATTTTAGCAT ATGGTCACGA TGATAGAATA TGTGCATATA CTTCAGCAGA AGCTTTAATG
GATTTAGAAA ATGTTGATAA AACATGTGTA GCATTATTAG TTGATAAAGA AGAAATAGGT
AGTGTGGGAG CTACAGGAAT GCAATCAAGA TTTTTTGAAA ATATAATTGC AGAACTTATG
GATAGAAAAG GAGAATATTC TGAGTTAAAG CTTAGAAGAT GTCTTCAAAA TTCAATGATG
TTATCAGCTG ATGTTACTGC AGCTTTTGAT CCAAACTATC CTTCTGTATG TGAAAAGAAA
AACACAGCTT ATTTTGGACA TGGAGTAGTA TTTAGCAAAT ATACAGGAGC TAGAGGAAAA
GCAGGTTGCA ATGATGCTAA TGCAGAATAT ATAGCTCACT TAAGAAATAT AATGGATAAA
AATGGTGTTG TATGGCAAAC TGGAGAGCTT GGAAAAGTAG ACCAAGGTGG CGGTGGTACA
ATCGCTTATA TATTAGCTCA ATACAATATG GAAGTTATAG ATTGTGGAGT AGCATTACAA
AATATGCATG CGCCTTTAGA AGTAGCATCT AAAGCAGATT TATATGAAAC TAAAAAATGT
TATAAGGCAT TTTTTGAAGA AGCATAA
|
|---|
| Protein sequence | MKDVKVLKKE YENAWTKYEE ADLKQVFSLS DRYREFMSVA KTERECVKVL ANMAESKGFK
NFYEVIKNGE KVTAGDKLYS INMDKTITLI KVGSEPLENG LRIIGAHIDS PRIDVKQNPL
YEDSGLALLD THYYGGVKKY QWVTIPLAIH GVVVKKDGTR VDIKIGEDEN DPVLGISDLL
IHLSADQLDK KGAKVVEGED LNILVGSMPL KGTEEKEAVK ANILVLLNEK YGITEEDFVS
AELEVVPAGK ARDYGLDRSM ILAYGHDDRI CAYTSAEALM DLENVDKTCV ALLVDKEEIG
SVGATGMQSR FFENIIAELM DRKGEYSELK LRRCLQNSMM LSADVTAAFD PNYPSVCEKK
NTAYFGHGVV FSKYTGARGK AGCNDANAEY IAHLRNIMDK NGVVWQTGEL GKVDQGGGGT
IAYILAQYNM EVIDCGVALQ NMHAPLEVAS KADLYETKKC YKAFFEEA
|
|---|
| |