Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1069 |
Symbol | |
ID | 4204279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1218150 |
End bp | 1218764 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565625 |
Product | hypothetical protein |
Protein accession | YP_698391 |
Protein GI | 110803485 |
COG category | [S] Function unknown |
COG ID | [COG5483] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000104806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATAT ATACTATAGG ACATTCTAAT TATGATTTAA GTAGACTTGT TGACATGCTA AATAAATATA ATATAAATTG TGTAGTTGAT ATAAGGGGAA TACCTTATTC TAAATATAAT GTGCAATACA ATAAAGAAAC AATTCAAAAA AATTTAAATG ACTTAGGATT TACATATATC TATATGGCAA AGGAATTTGC TGCAAAGAGA GATAGCAAAA TATCTTACAA TAAAGAAGGT TATGCTGATT TTCATAAGGT TATTAATGAG GAATCTTTTA AAAATGGAAT AGAGAGACTT AAAGTAGGAA TAAGTAAAGG ATATAGAATA GCTTTATTAG GTGCTATGCA GGAACCTGTA AGATGTCATA GAAGTATATT AGTCGGAAGA GAATTAAAAA AATATGGATT TAATGTTAAT CATATACTTC ACGATTATTC AATATGTGAT CAAAGAGAAA TAGAGAATAT GCTTTTAGAT AAATATTTTA AGGATAGAGG GCAGATTACC ATAGATTCAC TTATAGGAAA TGAAAAGAGT GAAGAGGAAA TGATAGAAGA AGGATATGAT TTAGCAAATA AAGAAATTGG ATATAGGATG GAAAAGCTAA AATAG
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Protein sequence | MEIYTIGHSN YDLSRLVDML NKYNINCVVD IRGIPYSKYN VQYNKETIQK NLNDLGFTYI YMAKEFAAKR DSKISYNKEG YADFHKVINE ESFKNGIERL KVGISKGYRI ALLGAMQEPV RCHRSILVGR ELKKYGFNVN HILHDYSICD QREIENMLLD KYFKDRGQIT IDSLIGNEKS EEEMIEEGYD LANKEIGYRM EKLK
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