| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1049 |
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| Symbol | |
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| ID | 4204931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1194804 |
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| End bp | 1195958 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565605 |
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| Product | ISCpe2, transposase orfB |
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| Protein accession | YP_698371 |
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| Protein GI | 110802891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00154487 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCCGAGCTA
ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA
ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAA
AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA
AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA
AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAATAG GTGGCAGACC TAAATTTAAG
TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTGG TAAAAGCTAA AGGTAATGTA
AATATTGAGA TAGTAGGTAA AGGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA
AATTCAAGAA ATGTAGATGG AAATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT
AAATATTTTG CATCTATTCT TTGTGATGTA AATATTCAAG AATTACCTAA AATAGATAAA
AAAGTTGGTG TAGATGTTGG ATTAAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA
GCTAATCCTA AACACTTTAG AAAGGCAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA
GCTCGTAAAG AATATAACTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA
CACGAAAGGA TAGTAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT
AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC
AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC
AAGGCTGAAT GGTATGGTAG AAAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA
CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ACCTAGGTCT AAGAGAATGG
GTATGTCCCG AATGTGAAAC ACACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA
AAGCTGATAG CTTAA
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| Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE
NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKIGGRPKFK
SKKNEIQSYT TKLVKAKGNV NIEIVGKGIK LPKLGLVKIE NSRNVDGNIK RVTVSRTQSG
KYFASILCDV NIQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKAE KRLIKLQRDL
ARKEYNSKNY HKNRIMIAKL HERIVNQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH
KLAKVISEAS WSEFRRMLEY KAEWYGRKIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW
VCPECETHHQ RDLNASINLE KLIA
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