| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1027 |
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| Symbol | |
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| ID | 4204843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1168894 |
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| End bp | 1170105 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642565584 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_698350 |
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| Protein GI | 110802900 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.155494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA TTTATAATAA TAGATATTAT GATTACAATA GATATTATGA TGATGAATAT
TATCAAGATG ATTATTATCA AAATGATTAT CACTGCAAAG AAGACTATTG TTGTAAAGAT
GATTGCTATT TAAAAATAAA TTGTAATTGT TGCAAGCCTG GACCAAGGGG ACCAAGAGGC
CCTCAAGGTG AACAAGGACC TCAAGGTGAA AGAGGATTTA CTGGCCCTCA AGGTCCTGTT
GGTCCTCAAG GTGAACAAGG ACCTCAAGGT GAAAGAGGAT TTACCGGTCC TCAAGGTCCT
ATTGGTCTTC AAGGTGAACA AGGACCTCAA GGTGAAAGAG GATTTACCGG TCCTCAAGGT
CCTGTTGGTC CTCAAGGTGA ACAAGGACCT CAAGGTGAAA GAGGATTTAC CGGTCCTCAA
GGTCCTGTTG GTCCTCAAGG TGAACAAGGA CCTCAAGGTG AAAGAGGATT TACCGGCCCT
CAAGGTCCTA TTGGTCCTCA AGGTGAACAA GGACCTCAAG GTGAAAGAGG ATTTACTGGC
CCTCAAGGTC CTATTGGTCC TCAAGGAAAT CAAGGTCCTA TTGGTCCCCA AGGTGAACAA
GGTCCTCAGG GCGCTACAGG ACCACAAGGT CCTCAAGGTC CTGTTGGTCC TCAAGGAAAT
CAAGGCCCTA TTGGTCCTCA AGGTCCTGTT GGTCCTCAAG GTCCTCAAGG GCAACCTGGA
GTTAATTTTA ACGATACCTT ATTAGTTAGT AGTTCTTCAT TATCTTCACA AAATGTTGGT
TCTAATGGTA TATTCACTTA TAATATCCAA AATCCTAATG GTTCAACTTT TACAGCAATA
ACTGCCAATA TAGCAAACGG AACGTTTACA ATAAATGAAC CTGGAAGATA TTTATTTATT
TGGTCATTTA ATTTAGATAA CACAAATAAT ACTACAGCTA ATACTATAGT ATCTTTATTT
AGAAATGGTT TTAGAATCTT TTTATCTGGT ACTCCTAGAG TAGCTCCTGG TGAAATAGGC
GTAGTAAATG GAAGTATTGC CGTAAATGCT AATGCTGGTG ATGTATTTGC TTTAGTTAAT
AATTCTACAA GAAACGTTTT ATCACAAATA ATATCTTCAC CAATTTCTGT AACTCCAGCT
ATCTTAGGAG AATCTACAGG GATAAATTCA GGAATAGGAT CTTGGGTTCA AATAGTTAAA
GTATCTGATT AA
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| Protein sequence | MRKIYNNRYY DYNRYYDDEY YQDDYYQNDY HCKEDYCCKD DCYLKINCNC CKPGPRGPRG
PQGEQGPQGE RGFTGPQGPV GPQGEQGPQG ERGFTGPQGP IGLQGEQGPQ GERGFTGPQG
PVGPQGEQGP QGERGFTGPQ GPVGPQGEQG PQGERGFTGP QGPIGPQGEQ GPQGERGFTG
PQGPIGPQGN QGPIGPQGEQ GPQGATGPQG PQGPVGPQGN QGPIGPQGPV GPQGPQGQPG
VNFNDTLLVS SSSLSSQNVG SNGIFTYNIQ NPNGSTFTAI TANIANGTFT INEPGRYLFI
WSFNLDNTNN TTANTIVSLF RNGFRIFLSG TPRVAPGEIG VVNGSIAVNA NAGDVFALVN
NSTRNVLSQI ISSPISVTPA ILGESTGINS GIGSWVQIVK VSD
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