Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1012 |
Symbol | |
ID | 4203965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1153130 |
End bp | 1154599 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565569 |
Product | amino acid permease family protein |
Protein accession | YP_698335 |
Protein GI | 110801741 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000367074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGG ATAAAAAAAT AAAGTTATGG GCATTGGTAA TGCTTATTTT CGTACCAACA TTTGGTTTTG GTAATATAGC AAGTAATGCT GTGTATTTAG GGCCAGCAGC TATTCCATCG TGGGTAATAG TATCTATTCT TTATTTCTTA CCTTTATGTG GAATAATAGC AGAAATGGCT TCAGCAAATA GAGATAAAGA AGGTGGGATA TATTCATGGA TAAATAAAGC TTTAGGTGAA AAATGGGCTT TTGTGGGAAC TTGGACTTAT TTCATAGGGA TATTATTTTA TTTACAAATG GTTTTTTCAA GAATACCAGT AGCTGCATCA TGGGCAATAC TTGGAAGAAA TATATTTACT GATTCTAATG CATATTTATT ACCTATTTTA TCAATTGTAA TATGTATAGC AATGACATAT GTAGCCACTA TAGGAGTAAG TAAGTTTTCA AAACTTGCTG ACTTTGGAGG ACAATTTACT TTAGCAGCAA CTGTTATATT TATATTAATG GCAATAGCAG GATATTTCAT TGGCAAACCT TCTGCAACAG AATTTACAGT TCAAAATATA ATTCCAGATT TTAGTGTGAG TTATTTTTCT ACATTCTCAT GGCTACTATT TGCAGTGTCA GGATCAGAAG TTGCAGGTAC TTATATAATG CAAACTGAAA ATCCTAAAAA GACATTTCCA AAGGCTATGA TAATTGCAAC AATTTTAATA GCACTCTCAT ACATTTTAGG TTCTGTAGCT ATACAGTTTA TAGCATCACC AGAAGTTTTG CAAAAGGCAG GAATTCAAGA TGCCGGTTAC GTTGTATATT ATATATTAGC TAATAATTTC GGAATAAATG GTAAGGTTAT AGTACAAGTA TATGCAGCTA TTAATTTAAT AACATCAATA GCAGCATATA TAATTTGGAT GGAATCACCA ATAAGAGCCA TGTTTGGAGA AGTTCCAAAG GGAACATTTC CAAGTTTCTT AACTAAGAAG AGAAAAGATG GAACTTTAGT AAATGCTTTA TGGACACAAT GTGCAATTTT AGTAGTATTA ATATCAATAC CTTTATTAGG AATAGGATCA ATTAATGATT TCTTTAAATT ATTAACAGAT TTATCATCTC TAGCAGTTGT TGTTCCATAT GTAGTCTTAA TATGTGCATT TATATCTTTT AGAAAACACA ATAAAGATTT AGACTTTAAA TTTTTTAAAA GTGATGCTTT AGCATACACA GTTGCAGGAA TAGCTTTAGT ACTTTCTTGT GCTGGATTCT TTGGTGCTGG CCTTCAAGAC ATTGTTAGAA GTTCAGGGAA AGACGCAACA ATTTTAATAA TAAAAACTTA TGGGGGACCT GTTATTCTTA TGGCTTTAGG TCTTGTTTTA AGAGCTTTAT CTGAAAAGTC ATATAAAAAT AAGAGTTTAG GCAATGAGAA TATTGAAGTT GAAATTGTTG AAGAGAGTAT ATGTGAATAG
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Protein sequence | MGKDKKIKLW ALVMLIFVPT FGFGNIASNA VYLGPAAIPS WVIVSILYFL PLCGIIAEMA SANRDKEGGI YSWINKALGE KWAFVGTWTY FIGILFYLQM VFSRIPVAAS WAILGRNIFT DSNAYLLPIL SIVICIAMTY VATIGVSKFS KLADFGGQFT LAATVIFILM AIAGYFIGKP SATEFTVQNI IPDFSVSYFS TFSWLLFAVS GSEVAGTYIM QTENPKKTFP KAMIIATILI ALSYILGSVA IQFIASPEVL QKAGIQDAGY VVYYILANNF GINGKVIVQV YAAINLITSI AAYIIWMESP IRAMFGEVPK GTFPSFLTKK RKDGTLVNAL WTQCAILVVL ISIPLLGIGS INDFFKLLTD LSSLAVVVPY VVLICAFISF RKHNKDLDFK FFKSDALAYT VAGIALVLSC AGFFGAGLQD IVRSSGKDAT ILIIKTYGGP VILMALGLVL RALSEKSYKN KSLGNENIEV EIVEESICE
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