Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0961 |
Symbol | |
ID | 4204136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1093378 |
End bp | 1093842 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565518 |
Product | hypothetical protein |
Protein accession | YP_698284 |
Protein GI | 110802666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000219081 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAA TTAAAAAATT TACTCCAAGA GTTAGTAAGA GAATTTTACT TTTTATAGCA GGATTAGTGT GGGGATTTGC AGGATTTAGA GTATTTACTT TAGGGTTTGG AGATGTTATG TCACATCACG GAAACTTAAT CATAACAATC ATTTTTGCAG CAGTTATATT TTTTGTGTTT TTTAAATTTA TATTTAGTAA AATGTTTAAG AAACATACAA CAAGAATAGT AAATAGTAAA CTTGATAAAC ATTGTGTATT TTCCTTCTTT GATTTTAAGA GCTATCTTAT AATGGGATTT ATGATTTTCT TTGGAATTTC AGTTAGAAAC TTAGGAATAT TTAATCCAGT TTATTTAGGA AATTTTTATA TGGGATTAGG AGCAGCACTA TTTATGGCTG GCGTATATTT CTTTGTGGGA TTCTTAACCT TTGATAATTT AAAAGTAAAA TATAAAATTA GCTAA
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Protein sequence | MDGIKKFTPR VSKRILLFIA GLVWGFAGFR VFTLGFGDVM SHHGNLIITI IFAAVIFFVF FKFIFSKMFK KHTTRIVNSK LDKHCVFSFF DFKSYLIMGF MIFFGISVRN LGIFNPVYLG NFYMGLGAAL FMAGVYFFVG FLTFDNLKVK YKIS
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