| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0959 |
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| Symbol | |
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| ID | 4206192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1090456 |
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| End bp | 1092378 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565516 |
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| Product | glycosyl hydrolase family 20 protein |
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| Protein accession | YP_698282 |
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| Protein GI | 110803708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00497875 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTA AATTAGTTGG ATTAAATGAG GAAATGTTAG AAGCTGTCAA GGGATTAGAA
GAACTAATTG ATTTTCAGCT TTATAATGAG AAGGGGAGTA AGAATGAAAA TTTAGAGATT
ATAAATGTTT CTAAGCTTCC TGAAGAATCA GAAAATGTAA TAGAAGTCCT TAGAGGAAAA
AATAATGAAA TAAGATATAA GAAAAAACAC CACTTTTTTA GAGCACTTAG TTTATATCTT
CAATTTCTTA AAAAGGGAGA GGAGAGTTTT TCAAGAAGTG AAAAAACTTA TATTGATTCA
GTAGGGGTAA TGATAGATGC CTCAAGAAAT GCTATTTATA GAGTTTCTGA GGTTAAAAGG
ATATTAGGGT ATATGGCCTT AATGGGACAT AATAGGTGTA TGCTTTATAC TGAAGATACT
TATGAGATTG AGGGTTATCC ATACTTTGGT TATATGAGAG GAAGATATAG CAAAGAGGAG
TTAAGGGAAA TTGATGATTA TGGATACTCT TTAGGTATAG AAGTTGTACC TTGCATTCAA
ACTTTAGCTC ACTTAAAACA AACTTTAAGA TGGCCTTATG GGGAAGGGAT GAAAGACACT
CAAGATGTAC TTTTAGTAGG AGAGGAAAAG ACTTATAGGT TTATAGAGGC AATGATTTCT
TCATTAAGAG AATGTTTTAG AAGTAAAAAT ATTCATATAG GTATGGATGA GGCTTTTGAT
TTAGGAAGAG GCCATTATTT AACTAAACAT GGACATGTTT CTCACCAAAA GCTTATGGTA
GAGCATTTAA ATAAGGTTAA TGAAATAGCA AAAAAATATG ATTTTAAGCC AATGATTTGG
GATGATATGT TTTTAAGATG TGGAGCTCCA GATGGTGGAT ATTACGATTT AGATATAGTT
ATAACTCCTG AAATAGCAAA TAATATTCCA GAGGAAGTTT CCTTAGTTTA TTGGGATTAT
TATAATTCTG ATGAAGAAAA ATATAAAAAG CTTTTAGATA TTAGAGATGA TTTTAATAAC
AATATTATCT TTGCAGGAGG ATGCTGGAGA TGGAGTGGAT TTGCTCCAAA CTATTCAAAG
ACCTTTGAAA CAACAAATGC TGCCTTAAAT CAATGTAAGG CTAAAGGAAT AAAAGAAGTC
TTTGCAACGG CTTGGGGAGA TGATGGATCA GAAACCCCAA TATATTCAAT AATAGTAGGT
CTTATATTAT TTGGAGAGCA TGGCTATTAT AACAAGGTAG AGAAAGAATG GATAGATGAA
AGATGCAAAT CTTTAACAGG GCTTAGCATG GAGGATTTTA CTTCTTTGGA AGAGTTAGAT
CTTGTTCCAA CAGTTAAAAC TCCTAATATG GAGGTTTGTA ATCCTTCAAA ATATATAGCC
TACCAAGATT TGCTTTTAGG AGCCTTTGAT AAGCATTTAG AGGGTTTAGA TTTAGAAGAA
CATTATATTA ATCTTTCTAA AAAATATGAG GAAATAGGAG AGAGAAGTGA GAGGTTTAAA
TTAATGTTTA CTATGTATTC TAAACTTGCT GCTTACCTTT CAGTTAAAAG TGAGATAGGA
CTAGAAATAA GAAAAGCTTA TTTAGAAAAG GATAAGGATG CCTTAAGACT TATAGCATAT
AACTTTATTC CAGAAATACA AGAAAAGCTA AAGAGTTTTC ATAAGAGTTT TAGGGATCTA
TGGTATAAGG AATGTAAAGG ACAAGGCTTT GAAGTTATAG ATATTAGACT TGGTGGAGTT
ATGGCAAGAT GTGATTCAGC TATTTATAGA ATAAAAGCTT ATCTTAAAGG AAATATTGAT
AAAATAGAAG AGCTAGAAGA GGAAAGACTT TATTTTTCTG AACATTTTGG AGGCGATGAT
TGTAAGCTTA TATGTTGCAA TGAATATGAA AAAATAGCAA CACAAAATAT TTTAAGTTGG
TAA
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| Protein sequence | MRVKLVGLNE EMLEAVKGLE ELIDFQLYNE KGSKNENLEI INVSKLPEES ENVIEVLRGK
NNEIRYKKKH HFFRALSLYL QFLKKGEESF SRSEKTYIDS VGVMIDASRN AIYRVSEVKR
ILGYMALMGH NRCMLYTEDT YEIEGYPYFG YMRGRYSKEE LREIDDYGYS LGIEVVPCIQ
TLAHLKQTLR WPYGEGMKDT QDVLLVGEEK TYRFIEAMIS SLRECFRSKN IHIGMDEAFD
LGRGHYLTKH GHVSHQKLMV EHLNKVNEIA KKYDFKPMIW DDMFLRCGAP DGGYYDLDIV
ITPEIANNIP EEVSLVYWDY YNSDEEKYKK LLDIRDDFNN NIIFAGGCWR WSGFAPNYSK
TFETTNAALN QCKAKGIKEV FATAWGDDGS ETPIYSIIVG LILFGEHGYY NKVEKEWIDE
RCKSLTGLSM EDFTSLEELD LVPTVKTPNM EVCNPSKYIA YQDLLLGAFD KHLEGLDLEE
HYINLSKKYE EIGERSERFK LMFTMYSKLA AYLSVKSEIG LEIRKAYLEK DKDALRLIAY
NFIPEIQEKL KSFHKSFRDL WYKECKGQGF EVIDIRLGGV MARCDSAIYR IKAYLKGNID
KIEELEEERL YFSEHFGGDD CKLICCNEYE KIATQNILSW
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