Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0941 |
Symbol | |
ID | 4204223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1074619 |
End bp | 1075245 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565499 |
Product | resolvase domain-containing protein |
Protein accession | YP_698265 |
Protein GI | 110803312 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2452] Predicted site-specific integrase-resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0143335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC ATTATAAGCC TAAAGAATTT GCAGAATTAT TAAATGTATC AGTTATTACA CTGCAAAGAT GGGATAATGA CGGAAAATTA AAGGCATTTA GAACTCCTAC AAATAGAAGA TACTACACTT ATGAACAGTA TCTTGAGTAT ATAGGAATAC ATAAAGAAAC AGATAGCAGA AAAATAGTTA TTTATACACG AGTTTCAACT TCTAATCAGA AAGATGACTT GAAAAATCAA GTTGAATTTC TTAGACAATA CGCTAATGCT AAAGGAATAA TAGTAGATGA AATCATAGAG GATTATGGAA GTGGACTAAA TTATAATCGT AAAAAATGGA ATAAACTTAT TGATAGTTGT ATGACAAATG AGATAAGTAC AATTATCATA ACTCATAAGG ATAGATTTAT TCGGTTTGGA TATGATTGGT TTGAAAGTTT TTTAGCTAAA TTCAATGTAA AGATTATAGT TGTAAATAAT GAAAGTCTTT CACCACAAAA AGAATTAGTC CAAGATATAA TATCAATACT TGATACTTTT AGTTGTCGCA TATATGGATT AAGAAAATAT AAGAAAAAAA TTAGAGATGA TGAAGAAGTT GAAAAGAGCA TAAAAGATAG AAATTAA
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Protein sequence | MSKHYKPKEF AELLNVSVIT LQRWDNDGKL KAFRTPTNRR YYTYEQYLEY IGIHKETDSR KIVIYTRVST SNQKDDLKNQ VEFLRQYANA KGIIVDEIIE DYGSGLNYNR KKWNKLIDSC MTNEISTIII THKDRFIRFG YDWFESFLAK FNVKIIVVNN ESLSPQKELV QDIISILDTF SCRIYGLRKY KKKIRDDEEV EKSIKDRN
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