Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0938 |
Symbol | |
ID | 4206533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1071634 |
End bp | 1073724 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565496 |
Product | periplasmic [Fe] hydrogenase 1 |
Protein accession | YP_698262 |
Protein GI | 110801841 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1592] Rubrerythrin [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0625857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC ACTTAGCTAC AACTATACGT GTAGCTATTG AGAAGGATAA TCCATCTATT TGTAGAGACG AAGAGAAGTG TATAAAATGT GGTTCATGTA AAAATATATG TACAGATTAT ATAGGTGTAA ATGGTCATTA TTCTTTAGAA AAAACTAATG ATATTGCTGT TTGTATAAAT TGTGGTCAAT GTGCAAATGT ATGCCCTACA TCTAGTATTA CCGAAGTTTT TGATTATAAA AAGGTAGAAG ATGCAATAAA TGATAAAGAT AAAATTGTAA TAGTTTCCAC ATCTCCAGCA GTTAGAGTAT CTTTAGGTGA AGAGTTTAAT ATGGACGATG GAAGTTTTGT TCAAGGTAAA ATGATAGCAT TGCTTCGTAA GTTAGGTTTT AAATATGTTC TTGATACTAA TTTTGCAGCT GATATGACTA TAGTAGAGGA AGCTAGTGAA TTGGTAGAAC GTATAACTAA AAATAATAAA CCGTTACCTC AATTTACTAG TTGTTGTCCT GCTTGGATAA AATATGCTGA AACTTTCCAC CCAGAGATAT TAGATCATAT TTCAACTTCA AAGAGTCCTA TAGGAATGCA AGGTCCTACT ATAAAAACCT ATTTTGCAAA GAACATGGGA ATTGACCCTT CTAAGATTAT AAATGTAGCT TTAACTCCAT GTACAGCTAA AAAATTTGAA ATAAAAAGAG AAGAAATGAA TGCATCAGGT AGATATTATG GCATAGAAGA TATGCGTGAT ATGGATTATG TTATAACAAC TAGAGAAGTG GCTATTTGGG CTAAAGAAAA AGGAATTGAT TTTAATTCTT TAGAGGATAG TAACTTTGAT AAATTAATGG GAGAAGCATC AGGGGCTGGT GTTATCTTTG CTAATACAGG TGGAGTTATG GAAGCTGCTT TAAGAACTGC ATATAAGTAT ATAACTAAAA AAGAACCACC TAAAGATTTT TATGATTTAG AAGCAGTAAG AGGTATGGAA GATATACGTG AAGCTAGTTT TAAAATAAAT GACTTAGATA TAAATGTAGC TGTTATATAT GGGACTGAAA ATGCTTCAAA ATTTATTTCA AAAATGAAAG ATTCTGATAA AAAATATCAT TTTGTTGAAG TGATGACTTG TCCAGGGGGA TGCATTGGTG GAGGTGGACA ACCTAAGGAT AAGAATTTAC AAGGTGATAA GCTTAGAGAA AAGCGTATAG ATGGTTTATA TAGAAGAGAT TCTAGTATGA AATTAAAAGT CAGTTGTGAA AATGAAGAGA TTAAAAATTT ATATAAAGAG TTTTATGGAA AACCTTTAAG CGATCTTGCT GAGAAAATGT TACATACAAC TTATTCAGAT AGAAGTAGTG ATTTAGGAGG AGAAAATATG AGTGAATCAG TAAAATATCG TTGTACAGTT TGTGGATACA TACAAGAAGG AGAATTACCA GAGGGATTTA TATGTCCAGT CTGTAAGAGT CCAGCATCAG TATTTGTAAA AGTTGAAGAA AAAACAGAGG TAGATGATAA AGAGGATAAT AAATCAAAAT CAACTAATGA AAGTAGTAAT AAATATAAAG GAACAAAAAC TGAAAAAAAT TTAATGGATG CATTAGCTGG AGAATCAATA GCTAGGAATA AATATACATT CTTTGCGGAT GTAGCTAAAA ATGAAGGATA TGAACAAATA TATAAACTAT TTTTAAAAAC AGCAGGAAAT GAAAGAGAGC ATGCTAAATT ATGGTTTAAA GAATTAGGAT ATTTAGGGGA TACTCAAGAG AATTTATTGC ACGGATCAGA AGGAGAGCAT TATGAATGGT CAGATATGTA TGCTAGATTT GCAAAAGAGG CTGAAGAAGA GGGATTTTTT GATTTAGCAG AAAAATTTGT GGAGGTTGCT AAAATAGAAA AATCTCATGA AGATAGATAT AGAAAGCTTT TAAACAATAT AAAGATGAAA AAGGTATTTG AAAAATCAGA AGAAACTATG TGGGAGTGCT TAAATTGTGG ATATCTTGTT ATGGGTAAAA AAGCTCCAGA GGTTTGTCCA GTATGTAATT ATGCTGAAGG ATTTTTTGAA GTAAGAGCAG AAAATTATTA A
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Protein sequence | MSKHLATTIR VAIEKDNPSI CRDEEKCIKC GSCKNICTDY IGVNGHYSLE KTNDIAVCIN CGQCANVCPT SSITEVFDYK KVEDAINDKD KIVIVSTSPA VRVSLGEEFN MDDGSFVQGK MIALLRKLGF KYVLDTNFAA DMTIVEEASE LVERITKNNK PLPQFTSCCP AWIKYAETFH PEILDHISTS KSPIGMQGPT IKTYFAKNMG IDPSKIINVA LTPCTAKKFE IKREEMNASG RYYGIEDMRD MDYVITTREV AIWAKEKGID FNSLEDSNFD KLMGEASGAG VIFANTGGVM EAALRTAYKY ITKKEPPKDF YDLEAVRGME DIREASFKIN DLDINVAVIY GTENASKFIS KMKDSDKKYH FVEVMTCPGG CIGGGGQPKD KNLQGDKLRE KRIDGLYRRD SSMKLKVSCE NEEIKNLYKE FYGKPLSDLA EKMLHTTYSD RSSDLGGENM SESVKYRCTV CGYIQEGELP EGFICPVCKS PASVFVKVEE KTEVDDKEDN KSKSTNESSN KYKGTKTEKN LMDALAGESI ARNKYTFFAD VAKNEGYEQI YKLFLKTAGN EREHAKLWFK ELGYLGDTQE NLLHGSEGEH YEWSDMYARF AKEAEEEGFF DLAEKFVEVA KIEKSHEDRY RKLLNNIKMK KVFEKSEETM WECLNCGYLV MGKKAPEVCP VCNYAEGFFE VRAENY
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