Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0915 |
Symbol | |
ID | 4205530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1046570 |
End bp | 1047130 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642565473 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_698239 |
Protein GI | 110803057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00714947 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAG ATTACTATAT TTTTTCTAAT GGAAGGATTA AAAGAAAGGA AAATACTATT TACTTTGAAG ATTTTGAAGG TAATAAAAAA GGTTTACCAA TTGAAGATAT AGAAAGACTT CATATATTCG GAGAGGTTGA CTTAAATACA AAGTTTTTAA ATTATATATC AAGATACAGT GTTCTTATAA GTATATATAA CTATTATGGA TTTTATAGTG GATCATATTA CTCTAAGAAG AAAAATGTTT CTGGAGTATT ATTAGTAAAT CAAGCTTTAG CGTATGATAA CTATGAATTT AGGGTGGCTA TAGCAAAGAC TTTTATAGAT TCTGCTATGC ATCATATATT AAGAAATCTT AGAAGATATA AAGAGAAAAC ATCTGAATTT GTAAAAGCAA TAGAAAATGA AAGAAAGATT ATGAAGGAAG CAAAAACAAT TGAAGAGGTT ATGGGAGCTG AAGGTAGAGC AAGAAAAAAA TATTATGAAT CATATAATGC TTTCTTAAAA ATGATTTTCA TTTTAATAAA AGAGAGAAAA AACCACCTAA CGATCCCATA A
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Protein sequence | MGRDYYIFSN GRIKRKENTI YFEDFEGNKK GLPIEDIERL HIFGEVDLNT KFLNYISRYS VLISIYNYYG FYSGSYYSKK KNVSGVLLVN QALAYDNYEF RVAIAKTFID SAMHHILRNL RRYKEKTSEF VKAIENERKI MKEAKTIEEV MGAEGRARKK YYESYNAFLK MIFILIKERK NHLTIP
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