Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0889 |
Symbol | |
ID | 4204096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1022942 |
End bp | 1024096 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565448 |
Product | ISCpe2, transposase orfB |
Protein accession | YP_698214 |
Protein GI | 110801679 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.688854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCCGAGCTA ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGA TTCTGTTGAA AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCATACC TAAATTTAAG TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTAG TAAAAGCTAA GGGTAATGTA AATATTGAGA TAGTAGGTAA AAGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA AATTCAAGAA ATGTAGATGG AAATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT AAATATTTTG CATCTATTCT TTGTGATGTA AATATTCAAG AATTACCTAA AATAGATAAA AAAGTTGGTG TAGATGTTGG ATTAAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA GCTAATCCTA AACACTTTAG AAAGGTAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA GCACGTAAAG AATATAACTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC AAGGCTGAAT GGTATGGTAG AGAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ACCTAGGTTT AAGAGAATGG GTATGTCCCG AATGTGGAAC ATACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA AAGCTGATAG CTTAA
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Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQDSVE NLGAGYDKYY KKTGGIPKFK SKKNEIQSYT TKLVKAKGNV NIEIVGKRIK LPKLGLVKIE NSRNVDGNIK RVTVSRTQSG KYFASILCDV NIQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKVE KRLIKLQRDL ARKEYNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH KLAKVISEAS WSEFRRMLEY KAEWYGREIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW VCPECGTYHQ RDLNASINLE KLIA
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