Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0805 |
Symbol | |
ID | 4205773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 930780 |
End bp | 931583 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642565364 |
Product | PTS system mannose/fructose/sorbose family IIC subunit |
Protein accession | YP_698130 |
Protein GI | 110802941 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTTAA ATATAATTCA AATAATATTA GTTATTATTA TTGCATTCTT AGCTGGTATG GGAGGTATCC TAGATGAATT CCAATTTCAT CAACCGTTAG TTGCTTGTAC TTTAATAGGT TTAGTTACAG GCAATTTAAT ACCTTGTTTA ATACTAGGTG GTAGTCTTCA AATGATCGCT TTAGGTTGGG CAAATATAGG TGCTGCCGTA GCACCAGATT CAGCATTAGC ATCTGTTGCA GCCGCAATTA TCTTAGTTCT TAGTGGAGAA GGTCAAGCTG GAATATCTTC AGCCATCGCT ATAGCAATTC CACTAGCTGT TGCTGGATTA TTATTAACAA TTATTTGTCG TACAATAGCT ACAGCATTTG TACATTTTAT GGATGCTGCT GCTAAAGAAG GTGATATAAG AAAAGTTGAA ATGTGGCATT TCATTGCTAT TCTTATGCAA GGTGTACGTA TAGCATTACC AGCTGCATTA ATTTTATTAA TAGGTGCTGG TCCAATAAGC GCATTACTTG CTTCTATGCC TGCTTGGTTA ACAGATGGTT TAGCAGTAGG TGGTGGAATG GTAGTAGCTG TTGGGTACGC AATGGTAATT AACATGATGG CAACAAAAGA AGTATGGCCA TTCTTTGCAA TCGGTTTTGT ATTAGCAACT ATTCCTCAAC TTACACTTAT AGGATTAGGT GCAATTGGTG TAGCTTTAGC TCTTATTTAC TTAGCACTTA GCAAAAAAGG TGGCTCAGGT AATAGCGGAT CAAACATAGG AGATCCAGTA GGCGATATTA TCGATAGATA CTAA
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Protein sequence | MDLNIIQIIL VIIIAFLAGM GGILDEFQFH QPLVACTLIG LVTGNLIPCL ILGGSLQMIA LGWANIGAAV APDSALASVA AAIILVLSGE GQAGISSAIA IAIPLAVAGL LLTIICRTIA TAFVHFMDAA AKEGDIRKVE MWHFIAILMQ GVRIALPAAL ILLIGAGPIS ALLASMPAWL TDGLAVGGGM VVAVGYAMVI NMMATKEVWP FFAIGFVLAT IPQLTLIGLG AIGVALALIY LALSKKGGSG NSGSNIGDPV GDIIDRY
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