| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0789 |
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| Symbol | |
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| ID | 4205550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 914818 |
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| End bp | 916650 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565348 |
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| Product | cymH protein |
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| Protein accession | YP_698114 |
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| Protein GI | 110802979 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA TTACAAGAGA GGCAATACAT CATATAGCTC AAAGCAATTA TTCTTATGGA
TATGATAATG AAACTTTGCA TTTAAGGGTT AGGACTAAAA AAGGTGAAGT AAATAAAGTG
GAAATAAGAA TTGGAGATCC TTACATATGG GACGAAGGTG GTTGCGATGG AGGAAATATG
AATGCCACTG GAGGACGATG GACAGGTGGA AAAAGTTATC CTATGAGAAA GGAATGTGAA
ACAAAATACT TTGATCACTG GATAGTTTAT TATAAACCAT TAACCAAACG TTCAAGATAT
GGATTTATAT TATATGGAGA TGAAGAAACT CTTTTATGCA CAGAAAAAAG AATAGAGGAG
TTAGATGGAA AGTATGATGA AGAAAAATTA AGTGCTATAG GAAACTTTTA TTGTTTTCCA
TATTTAAATG CCATAGATGT TGCTAAAACA CCACAATGGG TAAAAGATAC TGTTTGGTAT
CAAATATTCC CAGATAGATT TTGCAATGGA GATAAATCAA TAGATCCAGA AAATGTTGAG
CCATGGGGGA CAGAGCCTAC TAGGGATAAT TTTATGGGAG GAGATTTACA GGGAGTTTTA
GATAAATTAG ATTACTTATG CAATCTTGGA ATTAATGGAC TATATTTTTG TCCTGTATTT
GAAGCTACTG AGAATCATAG GTATGAAACC ATAGATTATT TTAAAGTAGA TCCAGCGCTT
GGTGGAAATG AAGTCTTTAA AAAACTTGTA AGTGAAGCTC ACAAAAGAGG AATGAAAATA
ATGTTAGATG CAGTATTTAA TCATATAGGT TATTTTTCAC CAAAATGGCA AGATGTATTA
AAGAATAATG AAAAATCAAG ATATAAGGAT TGGTTTTGTA TAAAGAAGTT TCCAGTACTT
GAAAATGGCT TAGAAAATGT TGACGGAAAT AATTTAAATT ATGAAACCTT TGGAAGAATA
GCCACAATGC CTAAACTAAA CACAGAAAAT CCAGATGTTG TAGAATATTT ATTAAAAGTT
GCTAAGTTCT GGGTTGAAGA AATGGATATA GATGGTTGGA GACTTGATGT ATGTAATGAA
GTAGACCATG TATTTTGGAG AAAATTTAGG GAAGTAGTAA AGGAAACTAA TAAAGAAGTT
TATATATTAG GAGAAGTTTG GCATGATGGA CTTCCATGGC TTATGGGAGA TCAGTTTGAT
GCAGTTATGA ATTACCCTGT TACAGATGCA GTAAAAGAAT ATTTCTGCTT AAATCAATCT
AATCCAGAAG ATTTTAAATA TATGATAGAA GCTAATAAGG TTAGCTATTT AAGACAAATA
GGAGAAACGA TATTTAACTT ATTAGATAGT CATGATACTC CAAGAATATT AACTGTTGCT
GGAGGAAACA AGAATAAGAT GAAACTAGCT TATCTATTTA TGTTTACTCA AGCTGGTTCT
CCATGTATAT ATTATGGAGA TGAAGTTGGT ATGGAAGGAA ATCAAGGAAT GGGTATGGAA
TTCCATAGAA GATGTATGAT TTGGGATGAA AATAAACAAG ACAAAGATAT GCTTAAGTTT
ATGAAACAAA TAATAAAAAT AAGAAAAGAA AATAAGGAAT TAAATTTATT AGATAACAAT
TGGATAAGAG CTAATAGAGA TGAAAATATA CTTATATATT CAAAGAAAAA TATATTCATC
ATTATGAACA ATTCAGATAA GGAAGAAAAG GTATTTTTAC CTAAAGAGAT TAAAAATAAT
AAGGTTAAGG ATTTATTTGA AGAAAAAATT GAATCTTTAA AAGAAGATGT AGAATTAAAG
CCCTTTGCAT TTAGAGTTTA TAAAAAGCTT TAA
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| Protein sequence | MSKITREAIH HIAQSNYSYG YDNETLHLRV RTKKGEVNKV EIRIGDPYIW DEGGCDGGNM
NATGGRWTGG KSYPMRKECE TKYFDHWIVY YKPLTKRSRY GFILYGDEET LLCTEKRIEE
LDGKYDEEKL SAIGNFYCFP YLNAIDVAKT PQWVKDTVWY QIFPDRFCNG DKSIDPENVE
PWGTEPTRDN FMGGDLQGVL DKLDYLCNLG INGLYFCPVF EATENHRYET IDYFKVDPAL
GGNEVFKKLV SEAHKRGMKI MLDAVFNHIG YFSPKWQDVL KNNEKSRYKD WFCIKKFPVL
ENGLENVDGN NLNYETFGRI ATMPKLNTEN PDVVEYLLKV AKFWVEEMDI DGWRLDVCNE
VDHVFWRKFR EVVKETNKEV YILGEVWHDG LPWLMGDQFD AVMNYPVTDA VKEYFCLNQS
NPEDFKYMIE ANKVSYLRQI GETIFNLLDS HDTPRILTVA GGNKNKMKLA YLFMFTQAGS
PCIYYGDEVG MEGNQGMGME FHRRCMIWDE NKQDKDMLKF MKQIIKIRKE NKELNLLDNN
WIRANRDENI LIYSKKNIFI IMNNSDKEEK VFLPKEIKNN KVKDLFEEKI ESLKEDVELK
PFAFRVYKKL
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