Gene CPR_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0772 
Symbol 
ID4206178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp899011 
End bp900162 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content30% 
IMG OID642565331 
ProductISCpe2, transposase orfB 
Protein accessionYP_698097 
Protein GI110803733 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA AAGCATATAA ATTTAGAATA TACCCAACTA AGAAACAAGC CGAGCTAATT 
AACAAGACTA TTGGATGTTG TAGGTTTGTA TTCAACTATT CTTTAGGTGT TCAAAAAACT 
AAAGATAATT ATTGGAATAT AGTTGAGGAG ATGGTTCAAC AAGGCTACTT CCAAGAGAAT 
AATTGGAAAG GCGAGTTCTT TAATAAAGCC AATTCAATTA AAGATATAGC TAAATTAAAG 
AAAAGCTATG ATTGGCTTAA AGAAGTAGAT AGCATAGCAC TACAGGCTTC TGTTGAAAAT 
CTTGGTGCTG GATATGATAA GTATTACAAA AAAAAAGGTG GCAGACCTAA ATTTAAGTCT 
AAGAAAAATG AAATACAATC TTATACTACT AAATTAGTAA AAGCTAAAGG TAATGTAAAT 
ATTGAGATAG TAGGTAAAGG AATTAAACTA CCTAAACTTG GATTAGTTAA GATAGAAAAT 
TCAAGAAATA TAGATGGAAA TATTAAAAGA GTTACTGTGA ACAGAACACA ATCTGGTAAA 
TATTTTGCAT CTATTCTTTG TGATGTAAAT ATTCAAGAAT TACCTAAAAT AGATAAAAAA 
GTTGGTGTAG ATGTTGGACT AAAAACTTTT GCTGTTTGTT CTGATGGATA TGAAGAAGCT 
AATCCTAAAC ACTTTAGAAA GGCAGAAAAA AGACTTATTA AACTTCAAAG AGATTTAGCT 
CGTAAAGAAT ATAACTCTAA AAACTATCAC AAAAATAGAA TTATGATTGC TAAATTACAT 
GAAAGGATAG CAAATCAAAG AATGGACTTC TTACAAAAAT TTTCAACTAA GCTAATTAGA 
GAAAACCAAT CAATAGCCAT TGAAGATTTA AGAGTTTCAA ATATGCTTAA AAACCACAAA 
CTTGCTAAAG TAATTTCAGA AGCAAGTTGG TCAGAATTTA GAAGAATGCT AGAATATAAG 
GCTGAATGGT ATGGTAGAAA AATAGTAATT GCTCCACCAG ACTATGCAAG CTCTCAACTA 
TGTTCTGAAT GTGGCTATAA GAATATAGAA GTTAAAAACC TAGGTCTAAG AGAATGGGTA 
TGTCCCGAAT GTGGAACACA CCAGCAAAGA GACCTTAATG CTTCAATAAA CTTGGAAAAG 
CTGATAGCTT AA
 
Protein sequence
MRKKAYKFRI YPTKKQAELI NKTIGCCRFV FNYSLGVQKT KDNYWNIVEE MVQQGYFQEN 
NWKGEFFNKA NSIKDIAKLK KSYDWLKEVD SIALQASVEN LGAGYDKYYK KKGGRPKFKS 
KKNEIQSYTT KLVKAKGNVN IEIVGKGIKL PKLGLVKIEN SRNIDGNIKR VTVNRTQSGK 
YFASILCDVN IQELPKIDKK VGVDVGLKTF AVCSDGYEEA NPKHFRKAEK RLIKLQRDLA 
RKEYNSKNYH KNRIMIAKLH ERIANQRMDF LQKFSTKLIR ENQSIAIEDL RVSNMLKNHK 
LAKVISEASW SEFRRMLEYK AEWYGRKIVI APPDYASSQL CSECGYKNIE VKNLGLREWV 
CPECGTHQQR DLNASINLEK LIA