Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0749 |
Symbol | |
ID | 4205752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 877076 |
End bp | 877915 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565309 |
Product | lactose operon transcriptional activator |
Protein accession | YP_698075 |
Protein GI | 110802593 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0693788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATAT TGTGGAAAAA GTATGTTAAA GAAAACTTTG AAATGAATGT AGATGAATGT GGTATAGAAC AAGGTATACC AGGATTAGGA TATAACTATG AAGTATTGAA AAATGCTGTT ATTCATTACG TAACTAAGGG ATATGGGACT TTTAAATTTA ATGGTAAAGT ATATACCTTA AAACAAGGTG ATATTTTTAT ACTACTAAAA GGTATGCAAG TTGAGTATGT GGCTTCTATT GATGACCCTT GGGAATATTA CTGGATAGGC TTTAGTGGCT CAAATGCTAA TGAATATTTA AATAGAACTT CTATTACTAA CTCCTGTGTT GCTAATTGTA AAGAAAACTC AAAAATTCCA CAGATAATAT TAAATATGTG CGAAATATCA AAAACTTATA ATCCTTCAAA ATCTGATGAC ATACTATTAC TAAAAGAACT TTACTCATTA TTGTACACAC TTATAGAAGA ATTCCCAAAA CCTTTTGAAT ACAAAGATAA GGAATTACAC ACATATATTC AAGATGCCCT TAATTTCATT AATTCTAATT ATATGCATAG CATAACTGTT CAAGAAATTG CTGATTATGT AAACTTAAGC AGAAGTTATT TATATAAAAT GTTCATAAAA AACCTTGGAA TTTCTCCTCA AAGATATTTA ATAAACCTTA GAATGTACAA AGCCACTCTT TTATTAAAAG GCACTAAACT TCCTATAGGT GAAGTTGCAA GTAGTGTAGG CTATAGTGAC TCACTGTTAT TTTCAAAAAC TTTTTCAAAA CATTTTTCAA TGTCCCCACT AAATTACAGA AATAATCAAG TAAATAAAAC AAGTATATAA
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Protein sequence | MQILWKKYVK ENFEMNVDEC GIEQGIPGLG YNYEVLKNAV IHYVTKGYGT FKFNGKVYTL KQGDIFILLK GMQVEYVASI DDPWEYYWIG FSGSNANEYL NRTSITNSCV ANCKENSKIP QIILNMCEIS KTYNPSKSDD ILLLKELYSL LYTLIEEFPK PFEYKDKELH TYIQDALNFI NSNYMHSITV QEIADYVNLS RSYLYKMFIK NLGISPQRYL INLRMYKATL LLKGTKLPIG EVASSVGYSD SLLFSKTFSK HFSMSPLNYR NNQVNKTSI
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