Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0714 |
Symbol | |
ID | 4205717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 835235 |
End bp | 836131 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565274 |
Product | LysR family transcriptional regulator |
Protein accession | YP_698040 |
Protein GI | 110802972 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA CTTATCTTAG ATCTTTCTAT ACAACAGTTA AGTGTAATAG TATTTCTAAA GCTGCGAAAC AATTGCATTT AACTCAACCA GGAGTTAGTA TGCAAATTCA AAAACTTGAA AATGATATAA ATTTTAAACT TTTAAATAGA AGTAATACTG GAGTAAGTTT AACAAGTGCT GGTGAAATAA TCTTTGAATT TGCTGAATCA ATGTTATCCA TAGAAGATAA CTTACAAAAA AAATTAGATG AATTAAAAAA TATTAATTCA AAACTTATTA TTTCTTGTTG TAAAAGTTTA GGTGAGCATG TAATGCCTTG CAGTATATAT ACATTTAAAG AAATTCATTA TAAGACTGAT ATCTCTATGG AAATAGATAA TACCTCAGAT ATATTAAAAA AATTAACTAA TCATGAAACA AATATAGGCA TTATTCAATG TAAACCTAGT GATTGTAAAA ACTTAGAACT TATTCCATTA ATGACTGATA AGCTAGTTTT AGTTGGTGGT AGAAATACTT CATTTAAATC AGTAAATGTT GAAGAACTTT ATAAACTTCC TTTAATAACA AGAGAAGATG GATCAGCTAA TAAATTATTG GTAGAATCAA GCTTAAAGAA AAATAAAATT AATATAGATA ATCTTAATTT TGTTTTATCC CTTAATTCTC CTCAATCAAT AAAATCTTCT GTATCTTTTG GACAAGGATA TTCATTTTTA CCTGCAATTT CTTTAAACCA TGAATTGAGA AGTGGTGAAT TAAAGAAAAT CGATATAAAT GATTTAAAAC TTCCTTTCCA ATACTATATT GCACTTAGAA AAAACTATAA ATTAGATTAT TATGAACAAA AATTTGTAGA TTTTCTAACC TCAAAAAAAA GATGCTTTTG CTATTAA
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Protein sequence | MNLTYLRSFY TTVKCNSISK AAKQLHLTQP GVSMQIQKLE NDINFKLLNR SNTGVSLTSA GEIIFEFAES MLSIEDNLQK KLDELKNINS KLIISCCKSL GEHVMPCSIY TFKEIHYKTD ISMEIDNTSD ILKKLTNHET NIGIIQCKPS DCKNLELIPL MTDKLVLVGG RNTSFKSVNV EELYKLPLIT REDGSANKLL VESSLKKNKI NIDNLNFVLS LNSPQSIKSS VSFGQGYSFL PAISLNHELR SGELKKIDIN DLKLPFQYYI ALRKNYKLDY YEQKFVDFLT SKKRCFCY
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