| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0706 |
|---|
| Symbol | |
|---|
| ID | 4206502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 826557 |
|---|
| End bp | 827561 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642565266 |
|---|
| Product | glycosyl transferase group 2 family protein |
|---|
| Protein accession | YP_698032 |
|---|
| Protein GI | 110803438 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.912597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA TGAGTGATAA GTTTTTAAGT ATAGTAATTC CTGCATATAA TTCAGAAAAG
TATATTGAAA AAAATCTTAT GTTTTTATCA AGACAAACAT CAAATAATTT TGAAGTAATA
GTTGTCGATG ATGGTTCAAC AGATAATACA TGTGAAGTAA GTGAAACCTG TTTAGAAAAC
TTTAAAATAG ATCATAGAGT GATTAGATGT GAAGAAAATA GAGGGCAGAG TGTTGCTAGA
AATATTGGAA TTAATTATTC AAGAGGAAAA TATATCTTAT TTTTAGACTC AGATGATTTT
GCAGAGAATA ATTTAGTTCA GATTTTAGAA AGAAATATGT TTAATGAACC TGATATAGTA
TTTTTTGATT ATAAAAGAAT CAAAGAGGAT GATAGTGTAA ATGTGAATAT AGCTCAAAAC
TTTGAGTTTG GAAAAATAAA ATCAGGTGAA GAAGTCTTTA ATGCTTATAA AGATAATAAA
ATAAGACTTT GGACTGGAAG TCTTGTCTAC AATAAGGAGT TCTTAAATAA AAATAAACTT
AGATTTTTAG AAGGTGCTCA TGGAGCAGAG GATTTAAACT TTATATTTAA GGCACTTTTA
AGTTCAAAGA AGGTTAGAGG AATAGAAGAT AGTTTAGTGT TTTATTGCCA AAGGGGAGAT
TCTTTAACTA ATAATCCTGA TATATACAAG AATATAACTG TAGTAGAATC AATGGAGGAT
GTAGCTAAAT TTATTGATGA AAATAAATTA GATAAAAAGC TTAAAGAAGC TATAGAAAAA
GAATTTACTT GTGAGCATAT TATGTATCAA ATATTAGGAT ATTTAAATAG TGAAACAAAG
AAAGATACTT TAAGTGTTAT TAAAAATAAA AATGTTAAAA AGTATTTAAA AAAAGCAACT
ATTAAAACAA ATAGATATGG AAGAAGTATG TACACTTATA TGAAGATAGC TGCATATTTT
CCAAATTTAT TTATAAAAAC ATATTTAAAA AATACAGGAA AATAG
|
|---|
| Protein sequence | MALMSDKFLS IVIPAYNSEK YIEKNLMFLS RQTSNNFEVI VVDDGSTDNT CEVSETCLEN
FKIDHRVIRC EENRGQSVAR NIGINYSRGK YILFLDSDDF AENNLVQILE RNMFNEPDIV
FFDYKRIKED DSVNVNIAQN FEFGKIKSGE EVFNAYKDNK IRLWTGSLVY NKEFLNKNKL
RFLEGAHGAE DLNFIFKALL SSKKVRGIED SLVFYCQRGD SLTNNPDIYK NITVVESMED
VAKFIDENKL DKKLKEAIEK EFTCEHIMYQ ILGYLNSETK KDTLSVIKNK NVKKYLKKAT
IKTNRYGRSM YTYMKIAAYF PNLFIKTYLK NTGK
|
|---|
| |