Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0701 |
Symbol | |
ID | 4204496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 820910 |
End bp | 822088 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642565261 |
Product | aspartate aminotransferase |
Protein accession | YP_698027 |
Protein GI | 110803176 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACTAG AGAATATGAT ATTAGATAAT GTAAAAAATA TGCCACCTTC AGGTATTAGA AAATATTTTG ATTTAATAAA TGAAATGGAA GATGTTATTT CTTTAGGGGT TGGGGAGCCT GATTTTGTAA CTCCATGGAA TGTTAGAGAG GCAGGAATTT ATTCTCTAGA GCAAGGACAT ACTCACTATT CATCAAATGC AGGATTTATA GAATTAAGAG AAGAGATATC AAAGTATTTA AACAGAAGAT TTTCTCTTAG ATATAATCCA AAGGATGAAA TACTTGTTAC TGTTGGGGGA AGTGAAGGGA TAGATTTAGC CCTTAGAGCT TTAGTAGGTC CTGGAGATGA GGTTATAATA CCTGAGCCAA GCTTTGTTGC TTATAAGGGA TGTACAGCAT TTACAGGAGC AACTGCCAAG ACAATAGATT TAAGAGCTTG TGATGATTTT AAATTAACTC CAGAACTTTT AGAAGAGGCT ATAACTGAGA AAACAAAGGT GGTAATAATT CCATTCCCTA ATAATCCTAC TGGAGCAATA ATGAATAAAG AAGAGCTTCA AAAGATTGTG GATGTTTTAA AGGATAAGGA TGTAATAATT ATTTCTGATG AAATATATGC AGAATTATCC TATGATGAGG ACCATGTTTC AATAGCTAGT TTCCCCGAGG TAAAGGAAAA AACTATAGTA ATAAATGGAT TCTCTAAAGC TTATGCTATG ACTGGATGGA GATTAGGATA TGTATGTGCT CATAAAGTTT TAATAGATGC TATGAAAAAG ATACATCAGT ATGCAATAAT GTGTTCACCA ACAACGGCTC AGTATGCTGC TATTGAGGCT CTTAAAAATG GTGATGAGAG CGTTTTTGAA ATGGCAAGGG AATATAATAG AAGAAGAAGA GTATTAGTTG ATGGATTTAG AAGTATGGGA TTAGATTGCT TTGAACCATT AGGAGCTTTA TATGTATTCC CATGTATAAA GTCAACTGGT ATGAGTTCAG ATGAATTTTG TGAAAAACTT CTTCTTGAAG AGAAGGTACT AGCTGTTCCA GGAAATGCTT TTGGAGAGTG TGGAGAAGGT TTTATAAGAG CTTGTTACGC AGCTTCAATG GAAGACATAA TGGAGGCTAT AAAGAGAATA AGAAGATTTG TTGAAAGAAA TAATATGCAA GGGAAATAG
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Protein sequence | MILENMILDN VKNMPPSGIR KYFDLINEME DVISLGVGEP DFVTPWNVRE AGIYSLEQGH THYSSNAGFI ELREEISKYL NRRFSLRYNP KDEILVTVGG SEGIDLALRA LVGPGDEVII PEPSFVAYKG CTAFTGATAK TIDLRACDDF KLTPELLEEA ITEKTKVVII PFPNNPTGAI MNKEELQKIV DVLKDKDVII ISDEIYAELS YDEDHVSIAS FPEVKEKTIV INGFSKAYAM TGWRLGYVCA HKVLIDAMKK IHQYAIMCSP TTAQYAAIEA LKNGDESVFE MAREYNRRRR VLVDGFRSMG LDCFEPLGAL YVFPCIKSTG MSSDEFCEKL LLEEKVLAVP GNAFGECGEG FIRACYAASM EDIMEAIKRI RRFVERNNMQ GK
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