| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0664 |
|---|
| Symbol | |
|---|
| ID | 4204487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 782708 |
|---|
| End bp | 783793 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 642565224 |
|---|
| Product | HRDC domain-containing protein |
|---|
| Protein accession | YP_697991 |
|---|
| Protein GI | 110803167 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0121317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG AAATTATTTT CGGAATTTCT TCTATAAAGG GACCTACATG GCTTAAAGAA
TTCAATGAGA ATAATAAACA ATTAGAAGAT TTAAAAATTC TTAGTGGAAA AGTTTATAGT
GAGAAAAAGA AATTAATAGA TAGAGATATT ATGTACTTAA CTTATGGTAT TGAGGGAGAA
AAAAATGTTA GTTATGAAAT AAAAAATTCC TATATACCAA TGTTAGCTTT ACATGATATT
AGGATAGAGG ACGGGGAATC AGTTGCCCAA ATGGATTATA TTCTAATAAC TAAAAGTTTT
ATTTTAGTCT TAGAAACTAA GGCCTTAAGT GGAGATATAA CTGTAAATGA GTCAGGAGAA
TTCATAAGAT ATTTTAAAAA TAAAGAAGGA AAAGTTTATA GAAAAGAAGG AATATACAGT
CCAGTAGCTC AAAATGAAAG ACCTGTTAGA GTGTTAACTG AGTATTTAAA GAAAAATAAA
ATGATAAAAA AATACCCTAT ATATTCTTGT GTAGTAATTG CAAAATCTAA AAGTGTAATA
AATAAGTATA AAGCACCAAA GGAAATAAAA TCACAAATTA TAAAATATGA TCAATTAACA
TCTTTTATAA AAGAGAAATT AAACTATCAT AAGATAAAGC AAGATTTTAA GGTTTTAGAT
AAAGTAGAAT ATTCAATAGG TAAATTTTTA TTAGAAAATA ATAAACCTGT AGAGTTTGAT
TATTATAAAA AATACTCCTT AAGTGAAGAG GATTTCATAA AAAAAGAGTC AGAAGTATGT
AGTGAAGAAA AATCAAACAA TGATAATTTT AATGATGAGG TTTTATTTAA TAGAGATAAT
AAATCTTATG AGGGTAAAAT ATTAATTAAT AAAAATAAAG AAGAACTGAG GAGAAAACTT
AAACAATTAA GAATAAATTT TGCAATAAAA GAAAAACTTC CTTCTTATTG CATTTTTAAT
GATGAGACTC TAAATGATCT TTTAGATAAA ATGCCAAAGA ATAAAGAAGA GCTTATGAAA
GTCAAGGGAT TGGCTAAGGT GAAGATTAAT AAATATGGGG AAGAAATATT AGGAGTTTTA
AATTAA
|
|---|
| Protein sequence | MLKEIIFGIS SIKGPTWLKE FNENNKQLED LKILSGKVYS EKKKLIDRDI MYLTYGIEGE
KNVSYEIKNS YIPMLALHDI RIEDGESVAQ MDYILITKSF ILVLETKALS GDITVNESGE
FIRYFKNKEG KVYRKEGIYS PVAQNERPVR VLTEYLKKNK MIKKYPIYSC VVIAKSKSVI
NKYKAPKEIK SQIIKYDQLT SFIKEKLNYH KIKQDFKVLD KVEYSIGKFL LENNKPVEFD
YYKKYSLSEE DFIKKESEVC SEEKSNNDNF NDEVLFNRDN KSYEGKILIN KNKEELRRKL
KQLRINFAIK EKLPSYCIFN DETLNDLLDK MPKNKEELMK VKGLAKVKIN KYGEEILGVL
N
|
|---|
| |