Gene CPR_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0648 
Symbol 
ID4204930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp769950 
End bp771002 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content30% 
IMG OID642565207 
ProductIS1470, transposase 
Protein accessionYP_697974 
Protein GI110802890 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATC AAAATCATAA CACAGAGTCA AGAAAAAATA AACACTTAAA TATGAAAGAG 
CGTATGATAG TTGAAATACG TCTTAAAGAT GGATTTTCAG CTTACAAAAT AGCAAAAGAA
CTAAATAGGC CTATAAATAC CGTTTTAAAT GAAATACGCC GTGGTACTAC TAAGCAAATT
AAGCAAGGTA AGGAATTAAA TATGTATTTT GCTGATACTG GTGAAGCTGT TTATAAGAAG
AATCGCTTAA AATCTAGTCG TAAATACAAA CTATTAGAAT GTAGTGATTT TATAAAATAT
GTAGTTGATA AAGTTAAGAA TGATCACTGG TCTTTAGATG CGTGTGTTGG TGAAGCTCTG
CATTCATCTA GATTTAGTCC TTCTCAAATT ATTTCGACAA AAACGCTTTA TAACTATGTA
GACCTTGGCT TATTACCTAT AAAAAATATA GATTTACCAG CTAAACTTCA TAGAAATAAA
AAGTCTACTA GAGTAAGAAA TAATAAGAAA AAGCTTGGCA CTAGCATTTC AGATCGTCCT
AATTCTATTG AAAACCGTGA AGAATTTGGA CATTGGGAAA TAGACTGTGT ATTAGGTGAA
AAATCTAATA AAGATAAGGT TTTGTTAACA CTTGTCGAGC GTAAAACTAG GTATGCTATA
ATATCTGAAA TGCCTTCCCA TTCAGCAATA TCTGTTACAC AGACTCTTGA TAAGATTAAA
GAATTTTTTG GCAGTAAATT TAGTGAAGTA TTTAAGAGTA TAACTGCTGA TAATGGCTCT
GAATTTGCTG ATTTATCAGA ATTTGAACTA AAAACAAAAA CTAAAGTGTA TTTCACTCAC
CCATATTCTT CATTTGAAAA AGGTACAAAT GAGCGTCATA ATGGACTGAT TAGGCGTTTT
ATCCCGAAAG GAAAACGAAT TTCAGATTAC TCACTTGAAA CTATATCTTT CATAGAAAAT
TGGATGAATA CTCTTCCTAG AAAGCTTCTT GATTACAAGA CTCCAGAAGA ATTATTTGAA
ATACACTTAG ATGAAATATA TTCATTATAT TAA
 
Protein sequence
MDYQNHNTES RKNKHLNMKE RMIVEIRLKD GFSAYKIAKE LNRPINTVLN EIRRGTTKQI 
KQGKELNMYF ADTGEAVYKK NRLKSSRKYK LLECSDFIKY VVDKVKNDHW SLDACVGEAL
HSSRFSPSQI ISTKTLYNYV DLGLLPIKNI DLPAKLHRNK KSTRVRNNKK KLGTSISDRP
NSIENREEFG HWEIDCVLGE KSNKDKVLLT LVERKTRYAI ISEMPSHSAI SVTQTLDKIK
EFFGSKFSEV FKSITADNGS EFADLSEFEL KTKTKVYFTH PYSSFEKGTN ERHNGLIRRF
IPKGKRISDY SLETISFIEN WMNTLPRKLL DYKTPEELFE IHLDEIYSLY