| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0593 |
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| Symbol | |
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| ID | 4205927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 709292 |
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| End bp | 710950 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565153 |
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| Product | cell wall binding repeat-containing protein |
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| Protein accession | YP_697920 |
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| Protein GI | 110803987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000201841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TATTTATTAC AAGTTTGACT AGCCTTATTA TTGTTAGTCT AATTCTAACA
ACAGGAACTA TAAGTGTACA AGCTGCAGAA AAAAATGAAA ATAAAATTAA TCAAAATCTT
AGTATTAAGA ATGGAAATGC TGATTTTATA TCATCTGTTG ATATAGAAAG ATTAGATAAT
AGCAAGATTG CTATAAAAAT AAATACTAAC AGCAATTATA ATGGAAATTC TTACAATATA
TCAGTTAGAG GACCTGGAAG TATAAATAAT ATATCTACGA ATGTTCCATA TCATGAGTTG
GATTTAACTA ATTATGGTAC ATATAATATA TATATTACAG TAACTGATAT ATATGGTATT
AGTGATAGTT ATTTTAAGAA CTATCACTAT TCATCACCTA TACAAGCAAG ATTTTTTGAA
ACAGTTGACA AAGCGACTAT AGGAGATGAG ATTAAATTTA ATGTTATTTC TTCAGGTGGA
AATGGAAGTC ATAAATACAA ATTTTATACT AAAGATGGTG TAATAAAAGA ATATTCATAT
AATTCTAGCT TAGTTACTAA ATTTAATGAA TACGGAGAAA AAGAATTGTT CTGTGATATA
AAAGATGAAG ATGACACAGT AAAAACTATT TCTCATAAGA TAAAAGTTAT AGCAAATGAA
CCAGCCTGGA AAAATGAAAA TAATAAATGG TATTATGTTA ATGATAAAGG TGAATTTATT
AAAGGATGGC TTAATTTAAA TAATGTTTGG TATTATTTAG ATGGTGAAAC TGGAGAAATG
AAAACAGGAC TTCAGGATAT AGGTGGATAT AGATATTATT TTGATGAAAG TGGTTATATG
AAAACTGGAT GGATTAATTA TAATGGAGAG TATAGGTTTT TTGGTTCTGA TGGAGCAATG
AGAACAGGAT GGGTAAATGA TGGGTGGACA GATTACTATT TAAAATCAGA TGGAACAATT
TATAAAGGGT GGTTAGATGA TGGATTAAAT AAATATTATA TGGATGAAAA TGGCCAAATG
AGAAAAGGGT GGATTAACTA TAACGGAGAA TATTATTTCT TTGGACCTGA TGGAGCAATG
AGAACAGGAT GGATAAATGA TGGTTGGACA GATTATTATT TAAAACCAGA TGGAACAATC
TTTAAAGGTT GGTTAGATGA TGGATTAAAT AAATATTATA TGGATGAAAA TGGCCAAATG
AGAAAAGGCT GGGTCAAACA TAACGGAGAA TATTATTTCT TTGGACCTGA TGGAGCAATG
AGAACAGGAT GGATAAATGA TGGATATGCG TATTATTTCT TAAATAATAA TGGTACAGTA
AAAAAAGGAT GGTTTGATGA AAATGGCATA AGATATTATT TAGGGTCAGA TGGAGCTATG
AGAACTGGTT GGCAAGTAAT AGGTGATAAT TGGTATCATT TTAATAATTC TGGAGCAATG
AGTAGAAGTA CAAGTATAGA TGGGTGGAAA ATAGATAAAG AAGGAATAGC AACACCTATT
AAAATTAATT CAACTGTATA TGTAACACCA AATGGAACAA GTTATCATTA TAGTAGAGAT
TGTACAACAT TAAAAAGAAG TCATCAAATA TTAAGTATGA GTCTAGATGA GGCTAAAGCT
AGTGGCAAAA ATGATCCTTG TAATGTATGT GTTAAATAA
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| Protein sequence | MKRIFITSLT SLIIVSLILT TGTISVQAAE KNENKINQNL SIKNGNADFI SSVDIERLDN
SKIAIKINTN SNYNGNSYNI SVRGPGSINN ISTNVPYHEL DLTNYGTYNI YITVTDIYGI
SDSYFKNYHY SSPIQARFFE TVDKATIGDE IKFNVISSGG NGSHKYKFYT KDGVIKEYSY
NSSLVTKFNE YGEKELFCDI KDEDDTVKTI SHKIKVIANE PAWKNENNKW YYVNDKGEFI
KGWLNLNNVW YYLDGETGEM KTGLQDIGGY RYYFDESGYM KTGWINYNGE YRFFGSDGAM
RTGWVNDGWT DYYLKSDGTI YKGWLDDGLN KYYMDENGQM RKGWINYNGE YYFFGPDGAM
RTGWINDGWT DYYLKPDGTI FKGWLDDGLN KYYMDENGQM RKGWVKHNGE YYFFGPDGAM
RTGWINDGYA YYFLNNNGTV KKGWFDENGI RYYLGSDGAM RTGWQVIGDN WYHFNNSGAM
SRSTSIDGWK IDKEGIATPI KINSTVYVTP NGTSYHYSRD CTTLKRSHQI LSMSLDEAKA
SGKNDPCNVC VK
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