Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0569 |
Symbol | |
ID | 4205726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 677687 |
End bp | 678409 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565129 |
Product | glutamine transport protein glnQ |
Protein accession | YP_697896 |
Protein GI | 110802768 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.909339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATG TTAGAAATTT ATATAAAAGT TTTGGTAAAA ATGAAGTTTT AAAAGATATA AATGAAACAA TAAAAAAGGG AGAAGTAGTA GTTATAATAG GACCTTCAGG ATCAGGAAAA AGCACATTTT TAAGATGCTT AAATTTATTA GAGGAACCCA CTTCAGGGGT AATTAATTTT GAAGGGGAAG ATATAACAGA TAAAAATGTT GATATAAATA AAATAAGAGA AAAGATGGGA ATGGTTTTTC AACAATTTAA TCTTTTCCCA CATAAAACAG TTATGGAGAA TTTAACAATA GGACCAACAA AAATAAAGAA GATTTCTAAT GGTAACGCTG TAAAAAAAGG AAGTGAATTA TTAGAAAAGG TTGGTCTTTT AGATAAAAAG AATGTTTATC CAAATTCACT TTCAGGAGGA CAAAAACAGA GAATAGCTAT AGCGAGAGCT TTAGCTATGG AACCAGATGT TATGCTTTTT GATGAGCCAA CATCTGCTTT GGATCCTGAA ATGGTAGGAG AAGTTTTAGG AGTTATGAAA TCTTTAGCTA AAGATGGAAT GACCATGGTT GTAGTAACCC ATGAAATGGG ATTTGCAAGG GAAGTTGGAG ATAGAATATT ATTTATGGAT GAAGGAAGAA TAATTGAAGA AGGTACTCCA GAGGAGATAT TTCAAAATCC TAAAAATTCA AGAACTAAAG ATTTTCTATC AAAAGTTTTA TAA
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Protein sequence | MINVRNLYKS FGKNEVLKDI NETIKKGEVV VIIGPSGSGK STFLRCLNLL EEPTSGVINF EGEDITDKNV DINKIREKMG MVFQQFNLFP HKTVMENLTI GPTKIKKISN GNAVKKGSEL LEKVGLLDKK NVYPNSLSGG QKQRIAIARA LAMEPDVMLF DEPTSALDPE MVGEVLGVMK SLAKDGMTMV VVTHEMGFAR EVGDRILFMD EGRIIEEGTP EEIFQNPKNS RTKDFLSKVL
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