| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0550 |
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| Symbol | |
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| ID | 4204088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 650364 |
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| End bp | 652256 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642565107 |
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| Product | fructose specific permease |
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| Protein accession | YP_697878 |
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| Protein GI | 110801496 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT CTCAATTATT AAGTCTTGAC ACAATAAAAC TAGACCTTGC TGCATCTAAT
AAAAATGAAG TTATAGACCA ATTAGTTGAT GTTTTGTGGG ATGCCGGAAA GTTAACTGAT
AAAAATCTTT ATAAAGAAGA AATTTTAAAA AGAGAAAGCT TATCTTCCAC TGGTATTGGC
GAAAGAATAG CAATTCCTCA CGCTAAAACA AAGGCAGTAA AAAATGCATC TTTAGCTCTT
GGTCTTTATA AAGATGGAGT AGATTATGAT TCACTTGATG GTGAACCTGT TAATATAGTA
TTTATGATTG CTGCTCCAGA TGGAGCAAAT GATGAGCATT TAGAAACTCT ATCTAGACTT
TCCGTACTTT TAATGAATCC TGATTTCAAA AATGGACTTT TAAATGCTAA AACACCAGAA
GAAGTTATTT CTCTTCTTGA TAAATTTGAA GAAAATGAAG AATCTGATGA AATTAATAAT
TCTAACGAAA TAGAAAATAA TTCAAATAAA AAATATATCT TAGCTGTCAC AGCATGTCCA
ACTGGTATTG CTCATACTTA CATGGCTGCT GATTCACTTA ACAAAACTGC TAAGGAAATG
GATATAAATA TAAAAGTTGA AACTAATGGT TCAACAGGTG TAAAAAATAG ATTAACTCAA
GAAGACATAG ATAATGCTGA TGGTATAATA GTTGCAGCCG ATAAACAAGT TGAAATGGCT
AGATTTAATG GTAAAAAGGT TGTAATAGTT CCTGTAGTTC AAGCTATGAA AAGACCTAAA
GAATTAATAA ACGAAGCATT AAGTGGCTCT GCTCCAGTTT ATTCTCATTC TGGAGATTCC
TCTAATCAAT CTTCTGGCAA GACTGAAAGA AGAGGATTTT ATAAACACTT AATGAATGGT
GTTTCAAATA TGTTACCATT TGTTGTTGGT GGGGGTATAT TAATAGCTAT ATCATTTATG
TTTGGTATTC ACTCAGCTGA AATAAATGAT CCTACTTTTA GTCCAATAGC CAAATTATTA
AAAGATATTG GTGGAGGAAA TGCTTTCTTC CTTATGATTC CTGTTCTTGC TGGATTCATT
GGATCAAGTA TAGCTGATAG ACCTGGATTT GCACCTGCTA TGGTTGGTGG TTTAATCGCT
GCTAACAGTG GTTCTGGCTT CCTTGGTGGA TTAATAGCTG GTTTCCTTGG TGGATATGTA
GTTGTATTAT TAAAGAAAAT ATTTAGTAAA TTACCTCAAT CACTAGAAGG TATTAAACCT
GTTTTACTGT ATCCTCTATT TGGTATCTTA ATAACTGGTG CCTTAATGTA CTTAGTAATT
GTGGGTCCTG TAACTGCTTT AAATAATAAC ATAGCAATAT GGTTACAAAA CATGGGAACT
GGAAACTTAG TTCTTCTTGG AATAGTATTA GGTGGAATGA TGGCTATAGA TATGGGAGGT
CCTATAAATA AGGCTGCATT TACCTTTGGT ATAGCTATGA TAGCTTCTGG AAACTACTAT
CCACATGCTG CTATAATGGC TGGTGGTATG GTACCTCCTT TAGCTACAGC TTTAGCAACT
ACTTTCTTCA AAAATAAATT TACTAAAGAT GAAAGAGATG CTGGTACTAC TAACTATATA
ATGGGATTAA CTTTCATAAC TGAAGGAGCT ATTCCATTTG CTGCCGCTGA CCCATTCAGA
GTTATACCTG CTTGTGTTAT AGGTTCAGCT CTAGCTGGAG GATTATCAAT GGTATTTAAA
ATAGGTTTAC CTGCTCCTCA TGGTGGAATA TTCGTAATTC CAGTAGTTGA AGGAAATCCT
CTTTTATATC TTCTATCAAT ATTAATAGGC TCTATTGTAG CTGCTCTAAT AATAGGATTC
TTAAAAAAAC CTGTAAATGA AATAAATAAA TAA
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| Protein sequence | MKISQLLSLD TIKLDLAASN KNEVIDQLVD VLWDAGKLTD KNLYKEEILK RESLSSTGIG
ERIAIPHAKT KAVKNASLAL GLYKDGVDYD SLDGEPVNIV FMIAAPDGAN DEHLETLSRL
SVLLMNPDFK NGLLNAKTPE EVISLLDKFE ENEESDEINN SNEIENNSNK KYILAVTACP
TGIAHTYMAA DSLNKTAKEM DINIKVETNG STGVKNRLTQ EDIDNADGII VAADKQVEMA
RFNGKKVVIV PVVQAMKRPK ELINEALSGS APVYSHSGDS SNQSSGKTER RGFYKHLMNG
VSNMLPFVVG GGILIAISFM FGIHSAEIND PTFSPIAKLL KDIGGGNAFF LMIPVLAGFI
GSSIADRPGF APAMVGGLIA ANSGSGFLGG LIAGFLGGYV VVLLKKIFSK LPQSLEGIKP
VLLYPLFGIL ITGALMYLVI VGPVTALNNN IAIWLQNMGT GNLVLLGIVL GGMMAIDMGG
PINKAAFTFG IAMIASGNYY PHAAIMAGGM VPPLATALAT TFFKNKFTKD ERDAGTTNYI
MGLTFITEGA IPFAAADPFR VIPACVIGSA LAGGLSMVFK IGLPAPHGGI FVIPVVEGNP
LLYLLSILIG SIVAALIIGF LKKPVNEINK
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