Gene CPR_0548 details

Gene Information

• Locus tag: CPR_0548
• ID: 4204996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 648503
• End bp: 649135
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565105
• Product: hypothetical protein
• Protein accession: YP_697876
• Protein GI: 110803245
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1392] Phosphate transport regulator (distant homolog of PhoU)

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATT TAAATCCTAA AGACGATAAA TTTTATGATA TGTTTATCGA TGAAGCAAAA 
AATGTAGAAA AAGCGGCAGT AATATTAAGC GAAGCCTTAG GGGATCTTGA AAATAAAACA 
AGCCACGTGG CTAGAGTTGA GGAGTTAGAA CATAAAGGCG ATGAAATAGT TCATAGACTT 
ATAGAAGAGT TAAATAATTC TTTTATAACT CCTATTGACA GAGAAGATAT ATTTTCTATA 
ACAAAAAGAA TGGATGATAT TTTAGATTCT ATAGAAAGTA CTATGCACAG ATTCACTATG 
TTCAATATAA ATGAATCTAA AGAAGGTGCT AAAGTTTTAG GAAGCTTAAT AGTTGATGCA 
TCAAGAGAAT TAGTATCTCT AATGGAAGAA TTTAAGCATA TGAAAAAGAA AAATAAAGAA 
ATTACAGAGA GAGTAATTTC AATAAATAAA ATAGAAAACA AAGGAGATAT CTTCTATAGA 
CAAATGATAT CAGAATTATT TGATGAAGAT GGAAAAACTC CAGTTCTTGA TATAATAAAA 
TGGAGAGAAA TATACAAATT CTTAGAGGCA ACTTTAGATA GTTGTGAGGC CGTAGCCAAT 
ATAGTTGAGG GAGTAGTGAT GAAGTATGTC TAG 

 

Protein sequence

MFNLNPKDDK FYDMFIDEAK NVEKAAVILS EALGDLENKT SHVARVEELE HKGDEIVHRL 
IEELNNSFIT PIDREDIFSI TKRMDDILDS IESTMHRFTM FNINESKEGA KVLGSLIVDA 
SRELVSLMEE FKHMKKKNKE ITERVISINK IENKGDIFYR QMISELFDED GKTPVLDIIK 
WREIYKFLEA TLDSCEAVAN IVEGVVMKYV