Gene CPR_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0539 
Symbol 
ID4204498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp638489 
End bp640078 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content25% 
IMG OID642565096 
ProductAraC family DNA-binding response regulator 
Protein accessionYP_697867 
Protein GI110803178 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGG TTATTATTGC TGATGATGAA AAAATATTTA GAATTGCTAT GAGAAATATA 
ATAGATTGGG AATCTCATGA TTTTAATATA GTTGGATTAG CTAAAGATGG TTTAGAAGTT
CTTAATATAC TAAAAGAAGA GGGAGCAGAT CTTATTATAA CAGATCTTAA AATGAAAGGA
TTAAATGGGA TTGAATTAAT AGATAAGCTT AAAGAAGAGA ATTTTATGGG GAAGATACTT
GTTCTTAGTA ATCATGGGGA GTATGAATTA GTTAGGGAAG CAATGAAAAA GGGTGCAGAT
GATTATTTAT TAAAAATAAC TTTAAGACCA AAGGAACTAG AAGATATAAT TGATAAATTT
AGGGAGAGTT TAGAAGAGAG GAAAAAGGAA GAAGAGAAAG AAGCTCAGTT TAAAAATGAA
TTTGATAAAA CAAGAAAAAT AGCTGAGATT TCCTTATTAA AGGAATATTT AAAGGGTGAT
CTATCTTATG AAGAACTTTT AAGTGAATTT CCAAAGATTA ATTTTTTAGA TGATAATTGT
GAATATTATA CTGGTGGCTG TATTTATATA GATAATTATA AAAAGATTTA TGAAGAAAAA
ATTAAGGATA AAAATAAATT GGCAATTACT ATACAAAACA TAATAAAAGA AGAATTTAGT
GTAAATGGGG TTAAGATTAT CCCAATAAAT AATCATAAAT ATATTTTTAT ATCTAAAATT
GATTTTAATA GTTTGAAGAT AAAAACAATA AATATACAAA ATTTAATAAT GCTTTATTTA
AATATTAAAG TTAGTGCTAT TTTAATAAAA AGAATAGATA GTGTGAAAGG CTTAAAAGAG
AGTTTTAAAA AGGTTGAGGA AATTCTTAGT CTAAAGTTTT ATGGAAAAGA AAATTTTTTA
ATAACAAGTG AAGAATTTTT GGGGTTTGGT GATGCTATTA AGCTTAGAAA GGAAGTAACA
GATGCCATTT TAGAGAATAT AGAGTTAGGA GAAGTTTCTG CTAATAAGGA ACTTATAAAA
GAATTTGCTA GAAGGTGTTC TAAGATGAAT GTAAAACCTT CAAATTTGAT AAACTATGTA
AATTTTATGT GTGAATTAAT AGAGAATCAT GAGTATGTAC AAGATGATTT AAATGATATA
AAAGAATTAA AAGGAAAGAT ATTAAAGAGT GATAACATAG AGGAATTAAT AAATAATTCA
ACTATTTTAA TAGATTACAT CAATCAAAGA TATATAAAGA GCAAAGAGCT TAGTTATAAA
AGAGAGGTTA ATGAGATTAT AAAGTTTATA GAAAAGAATA TTGATAAGAG AATAACCTTG
GTTATGGTGG CTAATGCTGT GAATTTAAAT GAAAGTTATT TAAGTAGAAT TTTTAAAAGT
GAAACAGGAA AAAATCTTAT GTACTTTATA AATGAAGTAA AGATGAAAAA GGCTAAGGAA
TTATTAAAAC AGCAAGATAC TTTAGTTAAA GAGGTTGCTA ACAGTATTGG AATGACAGAT
CAGTTTTATT TTAATAGAGT TTTTAAGAAG TTTTATGGGG TAAGTCCATC TAAGTTTAAA
AGTGATTATA ATAATAAAGT TTTGTCATAA
 
Protein sequence
MFKVIIADDE KIFRIAMRNI IDWESHDFNI VGLAKDGLEV LNILKEEGAD LIITDLKMKG 
LNGIELIDKL KEENFMGKIL VLSNHGEYEL VREAMKKGAD DYLLKITLRP KELEDIIDKF
RESLEERKKE EEKEAQFKNE FDKTRKIAEI SLLKEYLKGD LSYEELLSEF PKINFLDDNC
EYYTGGCIYI DNYKKIYEEK IKDKNKLAIT IQNIIKEEFS VNGVKIIPIN NHKYIFISKI
DFNSLKIKTI NIQNLIMLYL NIKVSAILIK RIDSVKGLKE SFKKVEEILS LKFYGKENFL
ITSEEFLGFG DAIKLRKEVT DAILENIELG EVSANKELIK EFARRCSKMN VKPSNLINYV
NFMCELIENH EYVQDDLNDI KELKGKILKS DNIEELINNS TILIDYINQR YIKSKELSYK
REVNEIIKFI EKNIDKRITL VMVANAVNLN ESYLSRIFKS ETGKNLMYFI NEVKMKKAKE
LLKQQDTLVK EVANSIGMTD QFYFNRVFKK FYGVSPSKFK SDYNNKVLS