Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0539 |
Symbol | |
ID | 4204498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 638489 |
End bp | 640078 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565096 |
Product | AraC family DNA-binding response regulator |
Protein accession | YP_697867 |
Protein GI | 110803178 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGG TTATTATTGC TGATGATGAA AAAATATTTA GAATTGCTAT GAGAAATATA ATAGATTGGG AATCTCATGA TTTTAATATA GTTGGATTAG CTAAAGATGG TTTAGAAGTT CTTAATATAC TAAAAGAAGA GGGAGCAGAT CTTATTATAA CAGATCTTAA AATGAAAGGA TTAAATGGGA TTGAATTAAT AGATAAGCTT AAAGAAGAGA ATTTTATGGG GAAGATACTT GTTCTTAGTA ATCATGGGGA GTATGAATTA GTTAGGGAAG CAATGAAAAA GGGTGCAGAT GATTATTTAT TAAAAATAAC TTTAAGACCA AAGGAACTAG AAGATATAAT TGATAAATTT AGGGAGAGTT TAGAAGAGAG GAAAAAGGAA GAAGAGAAAG AAGCTCAGTT TAAAAATGAA TTTGATAAAA CAAGAAAAAT AGCTGAGATT TCCTTATTAA AGGAATATTT AAAGGGTGAT CTATCTTATG AAGAACTTTT AAGTGAATTT CCAAAGATTA ATTTTTTAGA TGATAATTGT GAATATTATA CTGGTGGCTG TATTTATATA GATAATTATA AAAAGATTTA TGAAGAAAAA ATTAAGGATA AAAATAAATT GGCAATTACT ATACAAAACA TAATAAAAGA AGAATTTAGT GTAAATGGGG TTAAGATTAT CCCAATAAAT AATCATAAAT ATATTTTTAT ATCTAAAATT GATTTTAATA GTTTGAAGAT AAAAACAATA AATATACAAA ATTTAATAAT GCTTTATTTA AATATTAAAG TTAGTGCTAT TTTAATAAAA AGAATAGATA GTGTGAAAGG CTTAAAAGAG AGTTTTAAAA AGGTTGAGGA AATTCTTAGT CTAAAGTTTT ATGGAAAAGA AAATTTTTTA ATAACAAGTG AAGAATTTTT GGGGTTTGGT GATGCTATTA AGCTTAGAAA GGAAGTAACA GATGCCATTT TAGAGAATAT AGAGTTAGGA GAAGTTTCTG CTAATAAGGA ACTTATAAAA GAATTTGCTA GAAGGTGTTC TAAGATGAAT GTAAAACCTT CAAATTTGAT AAACTATGTA AATTTTATGT GTGAATTAAT AGAGAATCAT GAGTATGTAC AAGATGATTT AAATGATATA AAAGAATTAA AAGGAAAGAT ATTAAAGAGT GATAACATAG AGGAATTAAT AAATAATTCA ACTATTTTAA TAGATTACAT CAATCAAAGA TATATAAAGA GCAAAGAGCT TAGTTATAAA AGAGAGGTTA ATGAGATTAT AAAGTTTATA GAAAAGAATA TTGATAAGAG AATAACCTTG GTTATGGTGG CTAATGCTGT GAATTTAAAT GAAAGTTATT TAAGTAGAAT TTTTAAAAGT GAAACAGGAA AAAATCTTAT GTACTTTATA AATGAAGTAA AGATGAAAAA GGCTAAGGAA TTATTAAAAC AGCAAGATAC TTTAGTTAAA GAGGTTGCTA ACAGTATTGG AATGACAGAT CAGTTTTATT TTAATAGAGT TTTTAAGAAG TTTTATGGGG TAAGTCCATC TAAGTTTAAA AGTGATTATA ATAATAAAGT TTTGTCATAA
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Protein sequence | MFKVIIADDE KIFRIAMRNI IDWESHDFNI VGLAKDGLEV LNILKEEGAD LIITDLKMKG LNGIELIDKL KEENFMGKIL VLSNHGEYEL VREAMKKGAD DYLLKITLRP KELEDIIDKF RESLEERKKE EEKEAQFKNE FDKTRKIAEI SLLKEYLKGD LSYEELLSEF PKINFLDDNC EYYTGGCIYI DNYKKIYEEK IKDKNKLAIT IQNIIKEEFS VNGVKIIPIN NHKYIFISKI DFNSLKIKTI NIQNLIMLYL NIKVSAILIK RIDSVKGLKE SFKKVEEILS LKFYGKENFL ITSEEFLGFG DAIKLRKEVT DAILENIELG EVSANKELIK EFARRCSKMN VKPSNLINYV NFMCELIENH EYVQDDLNDI KELKGKILKS DNIEELINNS TILIDYINQR YIKSKELSYK REVNEIIKFI EKNIDKRITL VMVANAVNLN ESYLSRIFKS ETGKNLMYFI NEVKMKKAKE LLKQQDTLVK EVANSIGMTD QFYFNRVFKK FYGVSPSKFK SDYNNKVLS
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