Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0532 |
Symbol | ribA |
ID | 4206322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 631121 |
End bp | 632320 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642565089 |
Product | riboflavin biosynthesis protein RibA |
Protein accession | YP_697860 |
Protein GI | 110803604 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.720092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT TTAATTTAGT AGAAGAGGCA ATAGAAGATA TAAAAAATGG GAAAATGGTT ATTGTTATTG ATGATGAGGG AAGAGAAAAT GAGGGGGATC TAGTTATGGC TGGAGAACTT GTTACTGGAG AAAAAATAAA TTTTATGGCC ACTTATGGAA AGGGTTTAAT ATGTGCTCCA GTAAGTGAGA GTATAGCTGA AAGTTTAGGG TTGAATCCTA TGGTTTCACA TAATACAGAT AATCATGAAA CTGCCTTTAC AGTATCTATA GATTATAAAA ATACAACTAC AGGAATATCA GCCTTTGAAA GGGCTCATAC AATTAAAGAA TTAATAAATG AAGAAAGCAA GGCAGAGGAT TTTAGAAGAC CAGGACATGT ATTTCCTTTA ATAGCTAAGA ATGGTGGCGT TTTAAAGAGA GCTGGGCATA CAGAGGCGGC AATTGACTTA GCAAAGTTAG CTGGATTAAA AGAAGTTGGG GTAATATGTG AAATAATGAA AGATGATGGA ACTATGGCTA GAACTGATGA ATTATTAGAA TTTGCAAAGA TTCATAATAT GAAAATAATA ACTATAGAAG ATCTAATTGC TTATAGAACA GAAAGAGATA ATTTTGTTTA TAGAGTTGTT GAAACTAATA TGCCAACTAA ATATGGAGAG TTCAAGGCTA TTGGGTTTAT AGATAAACTT ACAGGGGAGC ATCATGTAGC TTTAGTTAAA GGAGAGATAA AATCAGAGGA GCCAGTATTA TTAAGAGTAC ATTCAGAATG CTTAACTGGA GATGTTTTTG GATCAAGGAG ATGTGATTGT GGAGAGCAAT TTCATAGGGC TATGGAAAAA ATAAATGAAG AGGGAAAAGG AATATTACTT TATATGAGAC AAGAAGGAAG AGGAATAGGT CTTATAAATA AGTTGAAAGC TTATAAGCTT CAAGATGAAG GATTAGATAC CGTAGAAGCT AATATAGCCT TAGGATTTCC AGAAGATCTT AGAGATTATG GCGTTGGAGC ACAAATTTTA AAAGAGTTAG GCGTAAGGGA AATCAGGTTA ATGAGCAATA ACCCTAAAAA AATAACTGGC TTAGAGGGAT ATGGACTTAA AATAGTAGAA AGAGTACCTA TAGAAATAAA GTGTAATGAG GAAAATGAGT TTTATTTGAA AACTAAGAAA GAGAAAATGC ACCATTTAAT AATGCAGTAA
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Protein sequence | MKKFNLVEEA IEDIKNGKMV IVIDDEGREN EGDLVMAGEL VTGEKINFMA TYGKGLICAP VSESIAESLG LNPMVSHNTD NHETAFTVSI DYKNTTTGIS AFERAHTIKE LINEESKAED FRRPGHVFPL IAKNGGVLKR AGHTEAAIDL AKLAGLKEVG VICEIMKDDG TMARTDELLE FAKIHNMKII TIEDLIAYRT ERDNFVYRVV ETNMPTKYGE FKAIGFIDKL TGEHHVALVK GEIKSEEPVL LRVHSECLTG DVFGSRRCDC GEQFHRAMEK INEEGKGILL YMRQEGRGIG LINKLKAYKL QDEGLDTVEA NIALGFPEDL RDYGVGAQIL KELGVREIRL MSNNPKKITG LEGYGLKIVE RVPIEIKCNE ENEFYLKTKK EKMHHLIMQ
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