Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0525 |
Symbol | |
ID | 4206594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 623002 |
End bp | 623823 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642565082 |
Product | PTS system, trehalose-specific IIB component |
Protein accession | YP_697853 |
Protein GI | 110801824 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.346126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGT TTGAAAAAGA TGCAAAGTTA CTAACAGAGT ACATAGGCGG AAAAGAAAAC GTAGCTGCAG TTACTCACTG TGCTACAAGA ATGAGATTCG TTTTAAATGA TACAAGCAAA GCAGATGTTG AAAAAATAAA AGCTATTCCT TGTGTAAAAG GGACTTTTAC CCAAGCAGGA CAGTTTCAAG TAATAATTGG ACCAGAAGTT GCAACTTTTT ATAATGATTT TGTTGGACAG ACTGGAGTAT CTGGAGAAAG TAAGGAAGAA GTCAAGAAGG CTGCCAAGAA GAATATGAAT ATAGTTCAGA GAGCCGTTGC AGGCTTAGCA GAAATATTTG CTCCATTAAT ACCAGCTATC ATAGTTGGAG GTCTTATATT AGGATTCCGT AATGTAATCG GAGATATGAA ATTATTTGAA GATGGAACTA AGAGTTTAGT TGAAATTTCT CAATTCTGGG CAGGAACACA TAGTTTCTTA TGGTTAATAG GGGAGGCGAT ATTCCACTTT TTACCTGTAG GGGTTGTTTG GTCAATTGCT AAGAAAATGG GAGCAGATCA AATGCTAGGA ATAGTTATTG GTATAACTTT AGTATCTCCA CAATTATTAA ATGCATATAG TGCAGGTAAT GGAGCAGCTG CTCCAGTTTG GGACTTTGGA TTTGCTCAAG TTCCAATGAT AGGATATCAA GCACAAGTTT TACCAGCAAT CATGGTTGGA TTCACTTTTG TTTACTTAGA AAGATTATTT AAGAAGATTA CACCAGGACC AATACAAATG ATAATAGTAC CATTTTTCTC AATAAGAAAC TTATTGAATT AA
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Protein sequence | MSKFEKDAKL LTEYIGGKEN VAAVTHCATR MRFVLNDTSK ADVEKIKAIP CVKGTFTQAG QFQVIIGPEV ATFYNDFVGQ TGVSGESKEE VKKAAKKNMN IVQRAVAGLA EIFAPLIPAI IVGGLILGFR NVIGDMKLFE DGTKSLVEIS QFWAGTHSFL WLIGEAIFHF LPVGVVWSIA KKMGADQMLG IVIGITLVSP QLLNAYSAGN GAAAPVWDFG FAQVPMIGYQ AQVLPAIMVG FTFVYLERLF KKITPGPIQM IIVPFFSIRN LLN
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