| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0454 |
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| Symbol | |
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| ID | 4205775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 541348 |
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| End bp | 542016 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565011 |
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| Product | glycosyltransferase, putative |
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| Protein accession | YP_697783 |
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| Protein GI | 110802943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000102874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGAAT CTATGGAGAA GATTCAAGAA GGAAAAGAAT ATATAAAAGT AGATCAAGGA
AATAGAGTAT ACTTATTTTT TAAGAGAGTA ATGGATATCC TTGGATCAGG CTTTGGATTA
ATCACATTAA GTCCATTATT TTTGATTGTA GCAATAGCTA TAAAATTTGA AGATAGCAAG
GGGAGTGTAC TATTTTCACA AAAAAGAGTT GGACAGTATG GTAAAGAATT TAATATGTAC
AAGTTTAGAT CCATGGTTAG TAATGCAGAA GAGCTTAAAG CTAAGCTTAT GGAGCAAAAT
GAAATGTCAG GACCTATGTT TAAAATGAAA CATGATCCTA GAATAACTAA GGTTGGAAAG
TTTATAAGAA AAACTAGTAT AGATGAACTT CCTCAGCTTA TAAATATTCT TAAGGGTGAA
ATGAGCTTAG TTGGTCCTAG ACCAAGCCTT CCAAAGGAAG TAGCTAAATT TGAACCTTGG
ATGTTAGAAA GGTTAGAAGT GAAGCCAGGA TTAACATGTT ATTGGCAAGT TATGGGGAGA
AATGATATAG ATTTTGAAGA TTGGATGAAG CTTGATATAA AGTATGTTCA TGATAGAAAT
CTTTTTTTAG ATATAAAATT GATTTTTAAA ACATTTTTTG TTCTTTTTGG AGATGAAAGT
GCAAGTTAA
|
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| Protein sequence | MYESMEKIQE GKEYIKVDQG NRVYLFFKRV MDILGSGFGL ITLSPLFLIV AIAIKFEDSK
GSVLFSQKRV GQYGKEFNMY KFRSMVSNAE ELKAKLMEQN EMSGPMFKMK HDPRITKVGK
FIRKTSIDEL PQLINILKGE MSLVGPRPSL PKEVAKFEPW MLERLEVKPG LTCYWQVMGR
NDIDFEDWMK LDIKYVHDRN LFLDIKLIFK TFFVLFGDES AS
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