| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0453 |
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| Symbol | |
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| ID | 4206051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 540495 |
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| End bp | 541148 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565010 |
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| Product | capsule synthesis gene, putative |
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| Protein accession | YP_697782 |
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| Protein GI | 110803878 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000667993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAATAT TAGAGAAAAA TCCAAAGTCA GTAGCAGCTG AAAGTTATAG AACCTTAAGA
ACAAACATAC AATACTCTTC CTTTGATAAT CCGGTAAAAT CTATTGTTAT TACTAGCTCT
GAGCCAGGAG AAGGTAAATC AACAACAAGT GCTAACTTAG CTCTTTCCTT TGCGCAAGAT
GGAAAAAAAG TAATACTTAT AGACTGTGAT TTAAGAAAAC CAGTTGTACA TAAAGAATTT
CAAATTAGTA ATTCTAGAGG ATTATCAGAA TTTTTAATTG GAAATGTTGA ATTTTCTAAG
GTGGTTTATA AACATGAATC AGGACTTCAT GTCTTGCCTT CGGGATTAGT TCCTCCAAAT
CCAGCTGAAA TGTTAGCTTC AAGATCTATG GAGCATCTTT TAACTCAATT AGAAGAAAAG
TATGATTACA TAATATTAGA CACTCCTCCA GTTAATGCAG TTACAGATTC AAAAATACTT
TCAACAAAGG TTGATGGAAC AATACTTGTT GTAAAGTATG GTTATACAAA GAAGGATGGA
GTAATAGAGG CTGTAAAGGG ACTAAGAGCA GTTAAAGCTA ATATAATAGG AACAGTATTT
AATGGAGAGG AAAATCAAAG GGGAAAATAC TATCACTATT ATAAGAAAGA TTAA
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| Protein sequence | MLILEKNPKS VAAESYRTLR TNIQYSSFDN PVKSIVITSS EPGEGKSTTS ANLALSFAQD
GKKVILIDCD LRKPVVHKEF QISNSRGLSE FLIGNVEFSK VVYKHESGLH VLPSGLVPPN
PAEMLASRSM EHLLTQLEEK YDYIILDTPP VNAVTDSKIL STKVDGTILV VKYGYTKKDG
VIEAVKGLRA VKANIIGTVF NGEENQRGKY YHYYKKD
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