Gene CPR_0422 details

Gene Information

• Locus tag: CPR_0422
• Symbol: trmB
• ID: 4204183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 510406
• End bp: 511065
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642564979
• Product: tRNA (guanine-N(7)-)-methyltransferase
• Protein accession: YP_697751
• Protein GI: 110802439
• COG category: [R] General function prediction only
• COG ID: [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase
• TIGRFAM ID: [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATGA GAAGAAAGCC TTGGGCTAGA CCAGAATTAG AAGCATGTGA CTTCTTTGTA 
GCTAATCCAA AAGAGAATAA AGGTAATTGG AAAAATACTT TTAAAAATAC AGAAAACCCA 
ATATATTTAG AATTAGGATG TGGAAAAGGA ACATTTATGG CTGTACATGG TTCTGACCAT 
CCAAACATAA ACTATATAGC AATAGATATA AAAGATGAAG TTCTTGTTTT AGCTAAAAGA 
AATATAGAAA AAGCATATGA GGAGAAAAAT AAAGCCTTAG ATAATGTTAA ATTAATGCCT 
CAAGAGATTG CTTTAATAGA TACTATATTA GATAGCAATG ACAAGATAGA AAGAATTTAT 
ATAAACTTCT GTAATCCATG GCCTAAAGAT AGACACAAGA AGAGAAGATT AACTCACCCA 
AGACAGTTAA CAAAATATAG AGATTTCTTA GTTGATGGTG GAGAAATTCA TTTTAAAACT 
GATGATGATG AGCTTTTTGA AGAATCTTTA GAGTATTTTA AAGAGTGTAA TTTTGAGATA 
ACTTACATAA CTCGTGATCT ACATAACAGT GGATATGAAT ACAATGTAGT AACAGAGCAT 
GAAGAAATGT TCTCAAAACA AGGAATAAAA ATAAAGTTTT TAATAGCTAA AAAGTTATAA 

 

Protein sequence

MRMRRKPWAR PELEACDFFV ANPKENKGNW KNTFKNTENP IYLELGCGKG TFMAVHGSDH 
PNINYIAIDI KDEVLVLAKR NIEKAYEEKN KALDNVKLMP QEIALIDTIL DSNDKIERIY 
INFCNPWPKD RHKKRRLTHP RQLTKYRDFL VDGGEIHFKT DDDELFEESL EYFKECNFEI 
TYITRDLHNS GYEYNVVTEH EEMFSKQGIK IKFLIAKKL